Job Description P29745 Confidence 100.00% Date Thu Jan 5 11:45:41 GMT 2012 Rank 37 Aligned Residues 359 % Identity 12% Template c3io1B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:aminobenzoyl-glutamate utilization protein; PDBTitle: crystal structure of aminobenzoyl-glutamate utilization2 protein from klebsiella pneumoniae Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.
Query Sequence		D	K	L	L	E	R	F	L	N	Y	V	S	L	D	T	Q	S	K	A	G	V	R	Q	V	P	S	T	E	G	Q	W	K	L	L	H	L	L	K	E	Q	L	E	E	M	G	L	I	N	V	T	L	S	E	K	G	T	L	M	A	T	L	P	A	N	V	P	G	.	.	.	.	.	D	I	P	A	I	G	F	I
Query Conservation																																																																					.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	X	T	Q	W	R	R	D	F	H	L	H	A	E	S	G	W	.	.	.	.	.	.	.	.	.	.	L	E	F	R	T	A	S	K	V	A	D	I	L	D	G	L	G	Y	Q	L	A	L	G	R	D	V	I	D	A	D	S	R	X	G	L	P	D	E	E	T	L	A	R	A	F	E	R	A	R	E	Q	G
Template Known Secondary structure														T			B	T	T	.	.	.	.	.	.	.	.	.	.																T	T						G	G	G	T	S		G	G	G			S																	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30											.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	V	D	T	S	P	D	C	S	G	K	N	V	N	P	Q	I	V	E	N	Y	R	G	G	D	I	A	L	G	I	G	D	E	V	L	S	P	V	M	F	P	V	L	H	Q	L	L	G	Q	T	L	I	T	T	D	G	K	T	L	L	G	A	D	D	K	A	G	I	A	E	I	M	T	A	L	A	V	L	Q
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Sequence		A	P	E	R	W	L	P	A	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	F	A	G	V	V	A	T	L	D	T	G	R	P	G	P	T	L	A	F	R	V	D	X	D	A	.	.	.	.	L	D	L	D	G	H	T	A	I	G	L	G	L	A	H	V	L	K
Template Known Secondary structure				T	T	T	G	G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T											S	S	S												B	.	.	.	.					T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.																						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		157	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.					.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure							.																											.	.	.	.																	.	.	.	.
Query SS confidence							.																											.	.	.	.																	.	.	.	.
Query Sequence		Q	K	K	I	P	.	H	G	D	I	R	V	A	F	T	P	D	E	E	V	G	K	G	A	K	H	F	D	V	D	A	F	.	.	.	.	D	A	R	W	A	Y	T	V	D	G	G	G	V	G	E	L	.	.	.	.	E	F	E	N	F	N	A	A	S	V	N	I	K	I	V	G	N	N	V	H	P	G	T	A
Query Conservation							.																											.	.	.	.																	.	.	.	.
Alig confidence							.																											.	.	.	.																	.	.	.	.
Template Conservation
Template Sequence		Q	Y	A	A	Q	L	N	G	V	I	K	L	I	F	Q	P	A	E	E	G	T	R	G	A	R	A	X	V	A	A	G	V	V	D	D	V	D	Y	F	T	A	I	H	I	G	T	G	V	P	A	G	T	V	V	C	G	G	D	N	F	X	A	T	T	K	F	D	V	Q	F	S	G	V	A	A	H	A	G	G	K
Template Known Secondary structure			T	G	G	G			S								S		T	T	T	T		S							T	T	T	T	T	T		S									T	T	S		T	T				S	S				B													B			B	T	T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																														.	.											.
Query SS confidence																														.	.											.
Query Sequence		K	G	V	M	V	N	A	L	S	L	A	A	R	I	H	A	E	V	P	A	D	E	S	P	E	M	T	E	.	.	G	Y	E	G	F	Y	H	L	A	S	.	M	K	G	T	V	E	R	A	D	M	H	Y	I	I	R	D	F	D	R	K	Q	F	E	A	R	K	R	K	M	M	E	I	A	K	K	V	G	K	G
Query Conservation																														.	.											.
Alig confidence																														.	.											.
Template Conservation
Template Sequence		P	E	D	G	R	N	A	L	L	A	A	A	Q	A	A	L	G	L	H	A	I	P	P	H	S	A	G	A	S	R	V	N	V	G	V	X	Q	A	G	T	G	R	N	V	V	P	S	S	A	L	L	K	V	E	T	R	G	E	S	E	A	I	N	Q	Y	V	F	E	R	A	Q	H	V	V	A	G	A	A	A	X
Template Known Secondary structure		G	G	G		B															T				B	T	T	B													S		T	T	B														S	S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350					.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure																																																.	.	.	.
Query SS confidence																																																.	.	.	.
Query Sequence		L	H	P	D	C	Y	I	E	L	V	I	E	D	S	Y	Y	N	M	R	E	K	V	V	E	H	P	H	I	L	D	I	A	Q	Q	A	M	R	D	C	D	I	E	P	E	L	K	.	.	.	.	P	I	R	G	G	T	D	G	A	Q	L	S	F	M	G	L	P	C	P	N	L	F	T	G	G	Y	N	Y	H	G
Query Conservation																																																.	.	.	.
Alig confidence															.	.	.	.	.	.																												.	.	.	.															.			.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.																																														.			.	.	.	.	.	.
Template Sequence		Y	E	A	R	Y	E	L	R	X	X	G	A	A	.	.	.	.	.	.	T	A	S	A	P	S	P	A	W	V	D	Y	L	R	E	Q	A	A	R	V	P	G	V	Q	Q	A	V	D	R	I	A	A	P	A	G	S	E	D	A	T	L	X	X	A	R	.	V	Q	.	.	.	.	.	.	A	R	G	G	L	A	S
Template Known Secondary structure		T	T												.	.	.	.	.	.																				S	T	T		S				S							B			T								.			.	.	.	.	.	.		T	T
Template Predicted Secondary structure															.	.	.	.	.	.																																														.			.	.	.	.	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.							.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.							.	.	.	.	390	.	.
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	E	F	V	T	L	E	G	M	E	K	A	V	Q	V	I	V	R	I	A	E	L	T	A	Q	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	X	I	F	G	T	E	S	V	X	A	V	A	V	E	T	L	A	R	V	A	L	N	F	P	W	Q	R
Template Known Secondary structure																								T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions