Job Description P29745 Confidence 100.00% Date Thu Jan 5 11:45:41 GMT 2012 Rank 2 Aligned Residues 405 % Identity 53% Template c3ifeA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase t; PDBTitle: 1.55 angstrom resolution crystal structure of peptidase t (pept-1)2 from bacillus anthracis str. 'ames ancestor'. Resolution 1.55 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	L	L	E	R	F	L	N	Y	V	S	L	D	T	Q	S	K	A	G	V	R	Q	V	P	S	T	E	G	Q	W	K	L	L	H	L	L	K	E	Q	L	E	E	M	G	L	I	N	V	T	L	S	E	K	G	T	L	M	A	T	L	P	A	N	V	P	G	D	I	P	A	I	G	F	I	S	H	V	D	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	L	I	E	R	F	T	R	Y	V	K	I	D	T	Q	S	N	E	D	S	H	T	V	P	T	T	P	G	Q	I	E	F	G	K	L	L	V	E	E	L	K	E	V	G	L	T	E	V	T	M	D	D	N	G	Y	V	M	A	T	L	P	A	N	T	D	K	D	V	P	V	I	G	F	L	A	H	L	D	T
Template Known Secondary structure													T	S			B			T	T			S	S	S	S	S																		T								T	T	S									B	S	S	S													B
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		S	P	D	C	S	G	K	N	V	N	P	Q	I	V	E	N	Y	R	G	G	D	I	A	L	G	I	G	D	E	V	L	S	.	P	V	M	F	P	V	L	H	Q	L	L	G	Q	T	L	I	T	T	D	G	K	T	L	L	G	A	D	D	K	A	G	I	A	E	I	M	T	A	L	A	V	L	Q	Q	K	K	I
Query Conservation																																		.
Alig confidence																																		.
Template Conservation
Template Sequence		A	T	D	F	T	G	K	N	V	K	P	Q	I	H	E	N	F	D	G	N	A	I	T	L	N	E	E	L	N	I	V	L	T	P	E	Q	F	P	E	L	P	S	Y	K	G	H	T	I	I	T	T	D	G	T	T	L	L	G	A	D	D	K	A	G	L	T	E	I	M	V	A	M	N	Y	L	I	H	N	P	Q
Template Known Secondary structure			T	T	S			S	S							T	T			S	S						T	T	T	T					T	T	T		T	T	G	G	G	G	T	T	S							S	S	S																						T		T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		161		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		P	.	H	G	D	I	R	V	A	F	T	P	D	E	E	V	G	K	G	A	K	H	F	D	V	D	A	F	D	A	R	W	A	Y	T	V	D	G	G	G	V	G	E	L	E	F	E	N	F	N	A	A	S	V	N	I	K	I	V	G	N	N	V	H	P	G	T	A	K	G	V	M	V	N	A	L	S	L	A	A
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		I	K	H	G	K	I	R	V	A	F	T	P	D	E	E	I	G	R	G	P	A	H	F	D	V	E	A	F	G	A	S	F	A	Y	M	M	D	G	G	P	L	G	G	L	E	Y	E	S	F	N	A	A	G	A	K	L	T	F	N	G	T	N	T	H	P	G	T	A	K	N	K	M	R	N	A	T	K	L	A	M
Template Known Secondary structure		S		B									S		G	G	G	T		T	G	G	G									S									S	T	T						B													B				G	G	G		T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	H	A	E	V	P	A	D	E	S	P	E	M	T	E	G	Y	E	G	F	Y	H	L	A	S	M	K	G	T	V	E	R	A	D	M	H	Y	I	I	R	D	F	D	R	K	Q	F	E	A	R	K	R	K	M	M	E	I	A	K	K	V	G	K	G	L	H	P	D	C	Y	I	E	L	V	I	E	D	S	Y
Query Conservation
Alig confidence																																																																							.
Template Conservation																																																																							.
Template Sequence		E	F	N	G	H	L	P	V	E	E	A	P	E	Y	T	E	G	Y	E	G	F	Y	H	L	L	S	L	N	G	D	V	E	Q	S	K	A	Y	Y	I	I	R	D	F	D	R	K	N	F	E	A	R	K	N	T	I	E	N	I	V	K	Q	M	Q	E	K	Y	G	Q	D	.	A	V	V	L	E	M	N	D	Q	Y
Template Known Secondary structure						T	S		T	T		S	G	G	G			T	T													S	S											S	S																								G	G	.	G
Template Predicted Secondary structure																																																																							.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	M	R	E	K	V	V	E	H	P	H	I	L	D	I	A	Q	Q	A	M	R	D	C	D	I	E	P	E	L	K	P	I	R	G	G	T	D	G	A	Q	L	S	F	M	G	L	P	C	P	N	L	F	T	G	G	Y	N	Y	H	G	K	H	E	F	V	T	L	E	G	M	E	K	A	V	Q	V	I	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	N	M	L	E	K	I	E	P	V	R	E	I	V	D	I	A	Y	E	A	M	K	S	L	N	I	E	P	N	I	H	P	I	R	G	G	T	D	G	S	Q	L	S	Y	M	G	L	P	T	P	N	I	F	T	G	G	E	N	Y	H	G	K	F	E	Y	V	S	V	D	V	M	E	K	A	V	Q	V	I	I	E
Template Known Secondary structure				T					G	G	G	T													T	T								B	S	S										T	T									S			S	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	E	L	T	A	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	R	R	F	E	E	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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