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Job DescriptionP29745
Confidence100.00%DateThu Jan 5 11:45:41 GMT 2012
Rank8Aligned Residues370
% Identity15%Templatec2zogA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cytosolic non-specific dipeptidase; PDBTitle: crystal structure of mouse carnosinase cn2 complexed with zn and2 bestatin
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50... ......60........
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Query Sequence  DKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEEMGLINVTLS. . . . . . . . . . . . . EKGTLMATLPANVPG
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Template Sequence  DRYVKKLAEWVAIQSVSAW. . . . PEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSD. . P
Template Known Secondary structure  S

BTT
....GGGTT




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   16...20.........30.... .....40.........50.........60.........70.........80........ .
 
   6970.........80.........90.........100.........110.........120.........130.........140........
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Query Sequence  DIPAIGFISHVDTSPDCSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGIAEI
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Template Sequence  QKKTVCIYGHLDVQPAAL. . . . . . . . . . . . . . . . . . . . . . . . . EDGWDSEPFTLVEREGKLYGRGST. . . . DDKGPVAGW
Template Known Secondary structure  TS


B



G.........................GGT
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   90.........100....... ..110.........120.........130. ........140
 
   149150.........160. ........170.... .....180...... ...190.........200.. .......210.......
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Query Sequence  MTALAVLQQKKIP. HGDIRVAFTPDEE. VGKGAKHFDVDA. . . . . FDARWAYTVDGGGVGE. . . . LEFENFNAASVNIKI
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Template Sequence  MNALEAYQKTGQEIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEV
Template Known Secondary structure  TT


SSS
GGGT
TTTTTTTTTT




B
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   141........150.........160.........170.........180.........190.........200.........210.........220
 
   218. 220.........230.........240.........250.....
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Query Sequence  VG. . NNVHPGTAKGVMVNALSLAARIHAEVPADESPEMTE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  ECSDKDLHSGVYGGSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSC
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SS
TTTS

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   221........230.........240.........250.........260.........270.........280.........290.........300
 
   256...260.... .....270.........280.........290.........300.........310.......
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Query Sequence  . . . . . . . . . . . . . GYEGFYHLA. . . . . SMKGTVERADMHYIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIED
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Template Sequence  KKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKFKVYMGH
Template Known Secondary structure  TS
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S
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   301........310.........320.........330.........340.........350.........360.........370.........380
 
   318.320.........330.........340... ......350..... ....360.........370....... ..380.........390..
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Query Sequence  SYYNMREKVVEHPHILDIAQQAMRDC. DIEPELKPIRGG. . TDGAQLSFMGLPCPNLFTGGYN. . YHGKHEFVTLEGMEK
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Template Sequence  GG. . KPWVSDFNHPHYQAGRRALKTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNYIE
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TTSSS

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   381. .......390.........400.........410.........420.........430.........440.........450........
 
   393......400........
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Query Sequence  AVQVIVRIAELTAQRK
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Template Sequence  GTKMLAAYLYEVSQLK
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   459460.........470....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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