Job Description P29745 Confidence 100.00% Date Thu Jan 5 11:45:41 GMT 2012 Rank 18 Aligned Residues 341 % Identity 14% Template c2rb7A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:peptidase, m20/m25/m40 family; PDBTitle: crystal structure of co-catalytic metallopeptidase (yp_387682.1) from2 desulfovibrio desulfuricans g20 at 1.60 a resolution Resolution 1.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	L	L	E	R	F	L	N	Y	V	S	L	D	T	Q	S	K	A	G	V	R	Q	V	P	S	T	E	G	Q	W	K	L	L	H	L	L	K	E	Q	L	E	E	M	G	L	I	N	V	T	L	S	E	K	G	T	L	M	A	T	L	P	A	N	V	P	G	D	I	P	A	I	G	F	I	S	H	V	D	T
Query Conservation
Alig confidence																							.	.	.	.	.	.	.																																					.	.
Template Conservation																							.	.	.	.	.	.	.																																					.	.
Template Sequence		Q	H	I	V	E	L	T	S	D	L	I	R	F	P	S	X	H	S	R	P	E	.	.	.	.	.	.	.	Q	I	S	R	C	A	G	F	I	X	D	W	C	A	Q	N	G	I	H	A	E	R	X	D	H	D	G	I	P	S	V	X	V	L	P	E	.	.	K	G	R	A	G	L	L	L	X	A	H	I	D	V
Template Known Secondary structure													T	S				T	T				.	.	.	.	.	.	.																T	T									T	T								S	B	.	.	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.																																					.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.								.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		S	P	D	C	S	G	K	N	V	N	P	Q	I	V	E	N	Y	R	G	G	D	I	A	L	G	I	G	D	E	V	L	S	P	V	M	F	P	V	L	H	Q	L	L	G	Q	T	L	I	T	T	D	G	K	T	L	L	G	A	D	D	K	A	G	I	A	E	I	M	T	A	L	A	V	L	Q	Q	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.																			.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Sequence		V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	D	D	L	F	V	P	R	V	E	N	D	R	L	Y	G	R	G	A	N	.	.	.	.	D	D	K	Y	A	V	A	L	G	L	V	X	F	R	D	R	L	N	A	L	K	A
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	G	S					T	T				S	T	T	T	T	.	.	.	.	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template SS confidence
		76	.																																.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
				158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure		.	.																		.
Query SS confidence		.	.																		.
Query Sequence		.	.	K	K	I	P	H	G	D	I	R	V	A	F	T	P	D	E	E	.	V	G	K	G	A	K	H	F	D	V	D	A	F	D	A	R	W	A	Y	T	V	D	G	G	G	V	G	E	L	E	F	E	N	F	N	A	A	S	V	N	I	K	I	V	G	N	N	V	H	P	G	T	A	K	G	V	M	V	N	A
Query Conservation		.	.																		.
Alig confidence		.	.																		.																																																		.
Template Conservation																																																																							.
Template Sequence		A	G	R	S	Q	K	D	X	A	L	G	L	L	I	T	G	D	E	E	I	G	G	X	N	G	A	A	K	A	L	P	L	I	R	A	D	Y	V	V	A	L	D	G	G	N	P	Q	Q	V	I	T	K	E	K	G	I	I	D	I	K	L	T	C	T	G	K	A	A	H	.	G	A	R	P	W	X	G	V	N	A
Template Known Secondary structure		T	T			G	G	G									S		G	G	G	T	S	T	T	T					G	G	G										S	S	S	B	T	T																			B				.	T	T	S	G	G	G	S	B
Template Predicted Secondary structure																																																																							.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.							.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.
Query Sequence		L	S	L	A	A	R	I	H	A	E	V	P	A	D	E	S	P	E	M	T	E	.	.	.	.	.	.	G	Y	E	G	F	Y	H	L	A	S	M	K	G	T	V	E	R	A	D	M	H	Y	I	I	R	D	F	D	R	K	Q	F	E	A	R	K	R	K	M	M	E	I	A	K	K	V	G	K	G	L	H	P	D
Query Conservation																							.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.																																														.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		V	D	L	L	X	E	D	Y	T	R	L	K	T	L	F	A	E	E	N	E	D	H	W	H	R	T	V	N	L	G	R	I	R	A	G	E	S	T	N	K	V	P	D	V	A	E	G	W	F	N	I	R	V	T	E	H	D	D	P	G	A	L	I	D	K	I	R	K	T	V	S	G	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T	S					T	T			S												S		T	T				S												T	T	S														S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		C	Y	I	E	L	V	I	E	D	S	Y	Y	N	M	R	E	K	V	V	E	H	P	H	I	L	D	I	A	Q	Q	A	M	R	D	C	D	I	E	P	E	L	K	P	I	R	G	G	T	D	G	A	Q	L	S	F	M	G	L	P	C	P	N	L	F	T	G	.	G	Y	N	Y	H	G	K	H	E	F	V	T	L
Query Conservation																																																																				.
Alig confidence		.	.	.	.	.	.																													.	.	.	.	.																												.
Template Conservation		.	.	.	.	.	.																													.	.	.	.	.
Template Sequence		.	.	.	.	.	.	T	V	S	I	V	R	T	V	P	V	F	L	A	A	D	S	P	Y	T	E	R	L	L	A	L	S	G	A	.	.	.	.	.	T	A	G	K	A	H	G	A	S	D	A	R	Y	L	G	E	N	G	L	T	G	V	V	W	G	A	E	G	F	N	T	L	H	S	R	D	E	C	L	H	I
Template Known Secondary structure		.	.	.	.	.	.																													.	.	.	.	.						S	S			G	G	G	G	T	G	G	G	T											T	T		T	T	S	T	T					T
Template Predicted Secondary structure		.	.	.	.	.	.																													.	.	.	.	.
Template SS confidence
								272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.						300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	M	E	K	A	V	Q	V	I	V	R	I	A	E	L	T	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	L	Q	S	I	Y	D	P	L	X	Q	L	A	R	E	X	E	E
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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