Job Description P29745 Confidence 99.55% Date Thu Jan 5 11:45:41 GMT 2012 Rank 60 Aligned Residues 357 % Identity 13% Template c2glfB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:probable m18-family aminopeptidase 1; PDBTitle: crystal structure of aminipeptidase (m18 family) from thermotoga2 maritima Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.														.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	D	K	L	L	E	R	F	L	N	Y	V	S	L	D	T	Q	S	K	A	G	V	R	Q	V	P	S	T	E	G	Q	W	K	L	L	H	L	L	K	E	Q	L	E	E	M	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	V	T	L	S	E	K	G	T	L	M	A	T	L	P	A	N	V	P
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.					.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	A	F	S	K	E	Y	X	E	F	X	S	.	K	A	K	T	.	.	.	.	.	.	.	.	.	.	.	.	E	R	X	T	V	K	E	I	K	R	I	L	D	E	S	G	F	V	P	L	E	D	F	A	G	D	P	X	N	X	T	V	Y	A	V	N	R	G	K	A	I	A	A	F	R	V	V	D	D	L
Template Known Secondary structure														T	.	T		S	S	.	.	.	.	.	.	.	.	.	.	.	.															T	T				G	G	G			S		T	T	S							S	S	S	S									S		G
Template Predicted Secondary structure															.					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.													.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		G	D	I	P	A	I	G	F	I	S	H	V	D	T	S	P	D	C	S	G	K	N	V	N	P	Q	I	V	E	N	Y	R	G	G	.	.	D	I	A	L	G	I	G	D	E	V	L	S	P	V	M	F	P	V	L	H	Q	L	L	G	Q	T	L	I	T	T	D	G	K	T	L	L	G	A	D	D	K	A	G	I
Query Conservation																																				.	.
Alig confidence						.									.	.	.	.																		.	.																								.	.														.	.	.	.	.	.
Template Conservation						.									.	.	.	.																																											.	.														.	.	.	.	.	.
Template Sequence		K	R	G	L	.	N	L	V	V	A	H	I	D	.	.	.	.	S	P	R	L	D	F	K	P	N	P	L	I	E	D	E	Q	I	A	L	F	K	T	H	Y	Y	G	G	I	K	K	Y	H	W	L	S	I	P	L	E	I	H	G	.	.	V	L	F	K	N	D	G	T	E	I	E	I	H	.	.	.	.	.	.
Template Known Secondary structure		G	G			.									.	.	.	.														S	S	S										S	S			G	G	G	G	T	T	S							.	.					T	T	S							.	.	.	.	.	.
Template Predicted Secondary structure						.									.	.	.	.																																											.	.														.	.	.	.	.	.
Template SS confidence
		85	.	.	.		.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.																.	.	.	.	.	.	.
Predicted Secondary structure																							.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	I	M	T	A	L	A	V	L	Q	Q	K	K	I	P	H	G	D	I	R	.	V	A	F	T	P	D	E	E	V	G	K	G	A	K	H	F	D	V	D	A	F	D	A	R	W	A	Y	T	V	D	G	G	G	V	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	F	E	N	F	N
Query Conservation																							.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.														.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	I	G	D	K	P	E	D	P	V	F	T	I	P	D	L	L	P	H	L	D	K	E	D	A	K	I	S	E	K	F	K	G	E	N	L	X	L	I	A	G	T	I	P	L	S	G	E	E	K	E	A	V	K	T	N	V	L	K	I	L	N	E	X	Y	G	I	T	E	E	D	F	V
Template Known Secondary structure		.	.	.	.	.	.	.	.		S	S	S	T	T	S			B							T	T	T							T	T	S	S	S		G	G	G											T	T		S	S																			G	G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		A	A	S	V	N	I	K	I	V	G	N	N	V	H	P	G	T	A	K	.	.	.	.	G	V	M	V	N	A	L	S	L	A	A	R	I	H	A	E	V	P	A	D	E	S	P	E	M	T	E	G	Y	E	G	F	Y	H	L	A	S	M	K	G	T	V	E	R	A	D	M	H	Y	I	I	R	D	F	D	R	K
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	E	I	E	V	V	P	A	F	S	P	R	E	V	G	X	D	R	S	L	I	G	A	Y	G	Q	D	D	R	I	C	A	Y	T	A	L	R	A	L	L	S	A	N	P	E	K	S	I	G	V	I	F	F	D	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	G	S	D	G	N	T	G	A
Template Known Secondary structure		T															S	S	S							T	T																				S	S								S	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T	S		S	T	T	S	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280														.	.	.	.	.	.	.	.	.	290
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.																																						.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	F	E	A	R	K	R	K	M	M	E	I	A	K	K	V	G	K	G	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	C	Y	I	E	L	V	I	E	D	S	Y	Y	N	M	R	E	K	V	V	E
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	R	F	Y	L	K	A	L	R	Q	I	L	K	X	Q	G	A	K	D	S	E	F	V	L	D	E	V	L	E	N	T	S	V	I	S	G	D	V	C	A	A	V	N	P	P	Y	K	D	V	H	D	L	H	N	A	P	K	L	G	Y	G	V	A	L	V	K	Y	T	G	A	R	G	K	Y	S	T	N	D	A
Template Known Secondary structure		T	S	S													T	T		S	S											S														G	G	G	G	G	G	S		G	G	G				T	T	S						S				S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.							.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																										.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.
Query Sequence		H	P	H	I	L	D	I	A	Q	Q	A	M	R	D	C	D	I	E	P	E	L	K	P	I	.	.	.	.	.	.	R	G	G	T	D	G	A	Q	L	S	F	M	G	L	P	C	P	N	L	F	T	G	G	Y	N	Y	H	G	K	H	E	F	V	T	L	E	G	M	E	K	A	V	Q	V	I	V	R	I	A	E
Query Conservation																										.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.
Template Conservation
Template Sequence		H	A	E	F	V	A	R	V	R	K	V	L	N	E	Q	G	V	I	W	Q	V	A	T	L	G	K	V	D	Q	G	G	G	G	T	I	A	K	F	F	A	E	R	G	S	D	V	I	D	X	G	P	A	L	L	G	X	H	S	P	F	E	I	S	S	K	A	D	L	F	E	T	Y	V	A	Y	R	S	L	X	E
Template Known Secondary structure																T	T								S	S	S	T	T	S						T						T	T	T											B	S	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
		403	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		451	.