Job Description P29745 Confidence 100.00% Date Thu Jan 5 11:45:41 GMT 2012 Rank 35 Aligned Residues 320 % Identity 13% Template c2cf4A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein ph0519; PDBTitle: pyrococcus horikoshii tet1 peptidase can assemble into a2 tetrahedron or a large octahedral shell Resolution 3.08 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	E	R	F	L	N	Y	V	S	L	D	T	Q	S	K	A	G	V	R	Q	V	P	S	T	E	G	Q	W	K	L	L	H	L	L	K	E	Q	L	E	E	M	G	L	I	N	V	T	L	S	E	K	G	T	L	M	A	T	L	P	A	N	V	P	G	D	I	P	A	I	G	F	I	S	H	V	D	T	S	P
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.																		.	.																.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.																		.	.																.	.	.	.
Template Sequence		X	I	E	K	L	K	K	F	T	Q	I	P	G	I	S	G	.	.	.	.	.	.	.	.	.	.	Y	E	E	R	I	R	E	E	I	I	R	E	I	K	D	F	A	.	.	D	Y	K	V	D	A	I	G	N	L	I	V	E	L	G	.	.	.	.	E	G	E	E	R	I	L	F	X	A	H	X	D	E	I	G
Template Known Secondary structure												S				T	T	.	.	.	.	.	.	.	.	.	.												T	T	T	T	S	S	.	.						S	S	S							S	.	.	.	.		S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																		.	.																.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.											.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		D	C	S	G	K	N	V	N	P	Q	I	V	E	N	Y	R	G	G	D	I	A	L	G	I	G	D	E	V	L	S	P	V	M	F	P	V	L	H	Q	L	L	G	Q	T	L	I	T	.	.	T	D	G	K	T	L	L	G	A	D	D	K	A	G	I	A	E	I	M	T	A	L	A	V	L	Q	Q	K	K	I	P
Query Conservation																																																	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.					.	.	.	.														.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.														.	.	.	.
Template Sequence		L	L	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	I	T	D	E	G	K	L	R	F	R	K	V	G	G	.	.	.	.	I	D	D	R	L	L	Y	G	R	H	V	N	V	.	.	.	.	V	T	E	K	G	I
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S								S		.	.	.	.			G	G	G	T	T	T						.	.	.	.			S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.														.	.	.	.
Template SS confidence
		67	.	.																																			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	D	I	R	V	A	F	T	P	D	E	E	V	G	K	G	A	K	H	F	D	V	D	A	F	D	A	R	W	A	Y	T	V	D	G	G	G	V	G	E	L	E	F	E	N	F	N	A	A	S	V	N	I	K	I	V	G	N	N	V	H	P	G	T	A	K	G	V	M	V	N	A	L	S	L	A	A	R	I
Query Conservation
Alig confidence																																																																.
Template Conservation																																																																.
Template Sequence		L	D	G	V	I	G	A	T	P	P	H	L	S	L	E	R	D	K	S	V	I	P	W	Y	D	L	V	I	D	I	G	A	E	S	K	E	E	A	L	E	L	V	K	P	L	D	F	A	V	F	K	K	H	F	S	V	L	N	G	K	Y	V	.	S	T	R	G	L	D	D	R	F	G	V	V	A	L	I	E	A
Template Known Secondary structure												S	S		S	S				S				T	T	S			B	B				S	S						T	T			T	T													S	S	S			.			T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.								.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.
Query Sequence		H	A	E	V	P	A	D	E	S	P	E	M	T	E	G	Y	E	G	F	Y	H	L	.	.	.	.	.	.	.	A	S	M	K	G	T	V	E	R	A	D	M	H	Y	I	I	R	D	F	D	R	K	Q	F	E	A	R	K	R	K	M	M	E	I	A	K	K	V	G	K	G	L	H	P	D	C	Y	I	E	L	V
Query Conservation																								.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	K	D	L	V	D	H	E	L	E	G	K	V	I	F	A	F	T	V	Q	E	E	V	G	L	K	G	A	K	F	L	A	N	H	Y	Y	P	Q	Y	A	F	A	I	D	S	F	A	C	C	S	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	D	V	K	L	G	K	G	P	V	I	R
Template Known Secondary structure				S	S	G	G	G			S	S								S	S		T	T	T	S							T	T	T				S	S										S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T			T	T	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.																.	.	.	.	240	.	.	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	D	S	Y	Y	N	M	R	E	K	V	V	E	H	P	H	I	L	D	I	A	Q	Q	A	M	R	D	C	D	I	E	P	E	L	K	P	I	R	G	G	T	D	G	A	Q	L	S	F	M	G	L	P	C	P	N	L	F	T	G	G	Y	N	Y	H	G	K	H	E	F	V	T	L	E	G	M	E	K	A	V
Query Conservation
Alig confidence				.	.	.	.	.	.																																									.
Template Conservation				.	.	.	.	.	.																																									.
Template Sequence		A	V	.	.	.	.	.	.	D	N	S	A	I	Y	S	R	D	L	A	R	K	V	W	S	I	A	E	K	N	G	I	E	I	Q	I	G	V	T	G	G	G	T	D	A	S	A	F	Q	.	D	R	S	K	T	L	A	L	S	V	P	I	K	Y	L	H	S	E	V	E	T	L	H	L	N	D	L	E	K	L	V
Template Known Secondary structure				.	.	.	.	.	.		S	S		B															T	T	T									S	S			G	G	G	G	T	T	.	T	S	S											S	T	T	T	T	T
Template Predicted Secondary structure				.	.	.	.	.	.																																									.
Template SS confidence
		249	250							.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		395	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	I	V	R	I	A	E	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	I	E	A	L	A	F	E	L
Template Known Secondary structure		T	T	S	S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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