Job Description P29745 Confidence 100.00% Date Thu Jan 5 11:45:41 GMT 2012 Rank 36 Aligned Residues 320 % Identity 17% Template c1y0yA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:frv operon protein frvx; PDBTitle: crystal structure of tetrahedral aminopeptidase from p. horikoshii in2 complex with amastatin Resolution 1.60 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	R	F	L	N	Y	V	S	L	D	T	Q	S	K	A	G	V	R	Q	V	P	S	T	E	G	Q	W	K	L	L	H	L	L	K	E	Q	L	E	E	M	G	L	I	N	V	T	L	S	E	K	G	T	L	M	A	T	L	P	A	N	V	P	G	D	I	P	A	I	G	F	I	S	H	V	D	T	S	P	D
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.																			.																.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.																			.																.	.	.	.
Template Sequence		Y	E	L	L	K	K	V	V	E	A	P	G	V	S	G	Y	.	.	.	.	.	.	.	.	.	E	F	L	G	I	R	D	V	V	I	E	E	I	K	D	Y	V	D	.	E	V	K	V	D	K	L	G	N	V	I	A	H	K	K	.	.	.	.	G	E	G	P	K	V	M	I	A	A	H	M	D	Q	I	G	L
Template Known Secondary structure											S			B	T	T		.	.	.	.	.	.	.	.	.	G	G	G	T										G	G	G	S	S	.						T	T									.	.	.	.		S	S											B
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.																			.																.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.										.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	S	G	K	N	V	N	P	Q	I	V	E	N	Y	R	G	G	D	I	A	L	G	I	G	D	E	V	L	S	P	V	M	F	P	V	L	H	Q	L	L	G	Q	T	L	I	T	T	D	G	K	T	L	L	G	A	D	D	K	A	G	I	A	E	I	M	T	A	L	A	V	L	Q	Q	K	K	I	P	H	G	D
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	H	I	E	K	N	G	F	L	R	V	A	P	I	G	.	.	G	V	D	P	K	T	L	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	S								S	.	.	S			G	G	G	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		75	.																																			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100																	.	.
		165	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure												.																										.
Query SS confidence												.																										.
Query Sequence		I	R	V	A	F	T	P	D	E	E	.	V	G	K	G	A	K	H	F	D	V	D	A	F	D	A	R	W	A	Y	T	V	D	G	G	G	.	V	G	E	L	E	F	E	N	F	N	A	A	S	V	N	I	K	I	V	G	N	N	V	H	P	G	T	A	K	G	V	M	V	N	A	L	S	L	A	A	R	I	H
Query Conservation												.																										.
Alig confidence												.																										.																									.
Template Conservation																																																															.
Template Sequence		F	K	V	W	I	D	K	G	K	F	I	Y	G	V	G	A	S	A	P	D	W	D	Q	I	F	I	D	I	G	A	E	S	K	E	E	A	E	D	M	G	V	K	I	G	T	V	I	T	W	D	G	R	L	E	R	L	G	K	H	R	F	.	V	S	I	A	F	D	D	R	I	A	V	Y	T	I	L	E	V	A
Template Known Secondary structure								T	T													G	G	G						S		S	S							T	T			T	T													T	T	T			.			T	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.							.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.
Query Sequence		A	E	V	P	A	D	E	S	P	E	M	T	E	G	Y	E	G	F	Y	H	L	.	.	.	.	.	.	A	S	M	K	G	T	V	E	R	A	D	M	H	Y	I	I	R	D	F	D	R	K	Q	F	E	A	R	K	R	K	M	M	E	I	A	K	K	V	G	K	G	L	H	P	D	C	Y	I	E	L	V	I	E
Query Conservation																							.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Q	L	K	D	A	K	A	D	V	Y	F	V	A	T	V	Q	E	E	V	G	L	R	G	A	R	T	S	A	F	G	I	E	P	D	Y	G	F	A	I	D	V	T	I	A	A	D	I	P	G	T	P	.	.	.	.	.	.	.	.	.	.	.	E	H	K	Q	V	T	H	L	G	K	G	T	A	I	K	I	M
Template Known Secondary structure						S		S	S								S			T	T	T	S													S													S	T	T			.	.	.	.	.	.	.	.	.	.	.	G	G	G					T	T	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.												.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																																							.									.	.
Query SS confidence																																							.									.	.
Query Sequence		D	S	Y	Y	N	M	R	E	K	V	V	E	H	P	H	I	L	D	I	A	Q	Q	A	M	R	D	C	D	I	E	P	E	L	K	P	I	R	.	G	G	T	D	G	A	Q	L	.	.	S	F	M	G	L	P	C	P	N	L	F	T	G	G	Y	N	Y	H	G	K	H	E	F	V	T	L	E	G	M	E	K	A
Query Conservation																																							.									.	.
Alig confidence								.	.	.	.	.	.																										.									.	.
Template Conservation								.	.	.	.	.	.
Template Sequence		D	R	S	V	I	C	.	.	.	.	.	.	H	P	T	I	V	R	W	L	E	E	L	A	K	K	H	E	I	P	Y	Q	L	E	I	L	L	G	G	G	T	D	A	G	A	I	H	L	T	K	A	G	V	P	T	G	A	L	S	V	P	A	R	Y	I	H	S	N	T	E	V	V	D	E	R	D	V	D	A	T
Template Known Secondary structure			T	T				.	.	.	.	.	.															T	T									S	S				T					T	T	S	T	T												B	S		S	S	S
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.							270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	V	I	V	R	I	A	E	L	T	A	Q	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	L	M	T	K	A	L	E	N	I	H	E	L	K
Template Known Secondary structure												G	G	G
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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