Job Description P29745 Confidence 43.49% Date Thu Jan 5 11:45:41 GMT 2012 Rank 89 Aligned Residues 89 % Identity 12% Template c1wtaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:5'-methylthioadenosine phosphorylase; PDBTitle: crystal structure of 5'-deoxy-5'-methylthioadenosine from aeropyrum2 pernix (r32 form) Resolution 1.78 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.																														.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	N	M	R	E	K	V	V	E	H	P	H	I	L	D	I	A	Q	Q	A	M	R	D	C	D	I	E	P	E	L	K	P	I	R	G	G	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	Q	L	S	F	M	G	L	P	C	P	N
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	H	V	S	M	A	D	P	F	C	E	D	L	R	Q	R	L	I	D	S	G	R	R	L	G	Y	T	V	H	E	R	G	T	Y	V	C	I	E	G	P	R	F	S	T	R	A	E	S	R	V	W	K	D	V	F	K	A	D	I	I	G	M	T	L	V	P	E	I	N	L	A	C	E	A	Q	L	C	Y	A	T
Template Known Secondary structure		B					S	S		S																T					S										S	S													T	S			S				S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.									.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.
Query Sequence		L	F	T	G	G	Y	N	Y	H	G	K	H	E	F	V	T	L	E	G	M	E	K	A	.	.	.	.	.	.	.	.	V	Q	V	I	V	R	I	A	E	L	T	A	Q	R	K
Query Conservation																									.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	M	V	T	D	Y	D	V	W	A	D	R	P	V	T	A	E	E	V	E	R	V	M	I	S	N	V	E	R	A	R	R	M	L	Y	D	V	I	P	K	L	A	G	E	P
Template Known Secondary structure									T	T	S	S	S	S																										G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions