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Job Description | P29745 | Confidence | 96.49% | Date | Thu Jan 5 11:45:41 GMT 2012 |
Rank | 84 | Aligned Residues | 77 |
% Identity | 16% | Template | c1cx8F_ |
PDB info |
PDB header:metal transport | Chain: F: PDB Molecule:transferrin receptor protein; |
PDBTitle: crytal structure of the ectodomain of human transferrin receptor
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Resolution | 3.20 Å |
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57 | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | L | M | A | T | L | P | A | N | V | P | G | D | I | P | A | I | G | F | I | S | H | V | D | T | S | P | D | C | S | G | K | N | V | N | P | Q | I | V | E | N | Y | R | G | G | D | I | A | L | G | I | G | D | E | V | L | S | P | V | M | F | P | V | L | H | Q | L | L | G | Q | T | L | I | T | T | D | G | K | T | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | I | F | G | V | I | K | G | F | V | E | P | D | . |
H | Y | V | V | V | G | A | Q | R | D | A | W | G | P | G | A | A | . |
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Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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388 | . | 390 | . | . | . | . | . | . | . | . | . | 400 | |
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137 | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | G | A | D | D | K | A | G | I | A | E | I | M | T | A | L | A | V | L | Q | Q | . |
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K | K | I | P | H | G | D | I | R | V | A | F | T | P | D | E | E | . |
V | G | K | G | A | K | H | F | D | V | D | A |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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K | S | G | V | G | T | A | L | L | L | K | L | A | Q | M | F | S | D | M | V | L | K | D | G | F | Q | P | S | R | S | I | I | F | A | S | W | S | A | G | D | F | G | S | V | G | A | T | E | W | L | E | G | Y |
Template Known Secondary structure |   |
. | . | . | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
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418 | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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