Return to main results Retrieve Phyre Job Id

Job DescriptionP25718
Confidence77.02%DateThu Jan 5 11:42:17 GMT 2012
Rank282Aligned Residues65
% Identity22%Templated2gjxa1
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-N-acetylhexosaminidase catalytic domain
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   228.230.........240.........250.........260.........270....... ..280.........290.......
Predicted Secondary structure 
































..........











Query SS confidence 

















































. . . . . . . . . .



















Query Sequence  LRGLTNKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYYT. . . . . . . . . . QDWTNLDANMGNEADLRTLV
Query Conservation 
 

  





 


 






                
    


  .......... 

  


 


 



 

Alig confidence 




















...................









..........



















Template Conservation     

  

 

  
 
 


...................



    


    
 
   

       

  

 


Template Sequence  LSSILDTLDVMAYNKLNVFHW. . . . . . . . . . . . . . . . . . . HLVDDPSFPYESFTFPELMRKGSYNPVTHIYTAQDVKEVI
Template Known Secondary structure  TT

...................


SS


B

SS
TSS
TTTS
B
Template Predicted Secondary structure 



...................

























Template SS confidence 















































































   183......190.........200... ......210.........220.........230.........240...
 
   298.300.........310.
Predicted Secondary structure 


Query SS confidence 













Query Sequence  DSAHQRGIRILFDV
Query Conservation    

 







 
Alig confidence 













Template Conservation   

  


 




Template Sequence  EYARLRGIRVLAEF
Template Known Secondary structure  TT

Template Predicted Secondary structure 




Template SS confidence 













   244.....250.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions