 |
Job Description | P25718 | Confidence | 48.51% | Date | Thu Jan 5 11:42:17 GMT 2012 |
Rank | 455 | Aligned Residues | 71 |
% Identity | 18% | Template | d1z7da1 |
SCOP info | PLP-dependent transferase-like
| PLP-dependent transferases
| GABA-aminotransferase-like
|
Resolution | 2.10 |
|
 |
  |   |
227 | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | L | R | G | L | T | N | K | L | D | Y | L | Q | Q | L | G | V | N | A | L | W | I | S | A | P | F | E | Q | I | H | G | W | V | G | G | G | T | K | G | D | F | P | H | Y | A | Y | H | G | Y | Y | T | Q | D | W | T | N | L | D | A | N | M | G | N | E | A | D | L | R | T | L | V | D | S | A | H | Q | R | G | I | R |
Query Conservation |   |
|
|   |
|
|   |   |
|
|
|
|
|
|   |
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |   |   |
|
|   |   |
|
|
|   |
|
|
|   |
|
|
|
|   |
|
|   |   |
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|   | . | . | . |   |   |   |   |
|   |
|
|   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |
Template Sequence |   |
D | L | E | A | L | E | E | E | L | K | . |
. |
. |
D | P | N | V | C | A | F | I | V | E | P | I | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | E | A | G | V | I | V | P | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | N | Y | L | Q | G | V | Y | D | I | C | K | K | Y | N | V | L |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | T | . | . | . | S | T | T |  |  |  |  |  |  |
| S | S | B | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S | T | T | T | S | B |
|
|
| . | . | . | . | . | . | . | . | . | . | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
180 | . | . | . | . | . | . | . | . | . | |
|
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 210 | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
  |
  |   |
307 | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | L | F | D | V | V | M | N | H | T | G | Y | A | T | L | A | D | M | Q | E | Y | Q |
Query Conservation |   |
|
|
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
F | V | A | D | E | V | Q | T | G | L | G | R | T | G | K | L | L | C | V | H | H | Y |
Template Known Secondary structure |   |
 |  |  |  |
| T | T | T | T | T | T | T | T | S | S | S | S | G | G | G | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
229 | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|