Job Description P25718 Confidence 92.88% Date Thu Jan 5 11:42:17 GMT 2012 Rank 186 Aligned Residues 243 % Identity 19% Template d1x1na1 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.80

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		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		A	D	L	R	T	L	V	D	S	A	H	Q	R	G	I	R	I	L	F	D	V	V	M	.	.	N	H	T	G	Y	A	T	L	A	D	M	Q	E	Y	Q	F	G	A	L	Y	L	S	G	D	E	V	K	K	S	L	G	E	R	W	S	D	W	K	P	A	A	G	Q	T	W	H	S	F	N	D	Y	I	N	F	S
Query Conservation																									.	.
Alig confidence																									.	.																		.																			.	.	.	.						.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.																			.	.	.	.						.	.	.	.	.	.	.	.	.	.
Template Sequence		R	Q	W	K	K	V	R	D	Y	A	R	S	K	G	I	S	I	M	G	D	M	P	I	Y	V	G	Y	H	S	A	D	V	W	A	N	K	K	Q	F	L	L	N	.	R	K	G	F	P	L	I	V	S	G	V	P	P	D	A	F	S	E	.	.	.	.	T	G	Q	L	W	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T									S	S			S	S	S					T		G	G	G	B		B		.	T	T	S		B	S					B			S	S	S	S	S	.	.	.	.			B			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.																			.	.	.	.						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.					.	.	.	.	.
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	T	G	W	D	K	W	W	G	K	N	W	I	R	T	D	I	G	D	Y	D	N	P	G	F	D	D	L	T	M	S	L	A	F	L	P	D	I	K	T	E	S	T	T	A	S	G	L	P	V	F	Y	K	N	K	M	D	T	H	A	K	A	I	D	G	Y	T	P	R	D	Y	L	T	H	W	L	S	Q	W
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	P	L	Y	D	W	K	A	M	E	K	D	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	W	V	R	R	I	Q	R	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			B		B								T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																				287	.	.	290	.	.	.	.	.	.	.	.	.	300	.																						.	.	.	.	.	.	.	.	310	.
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.																							.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	R	D	Y	G	I	D	G	F	R	V	D	T	A	K	H	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	P	A	W	Q	Q	L	K	T	E	A	S	A	A	L	R	E	W	K	K	A	N	P	D	K	A	L	D	D	K	P	F	W	M	T	G	E	A	W	G
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	L	.	.	F	D	E	F	R	I	D	H	F	R	G	F	A	G	F	W	A	V	P	S	E	E	K	I	A	I	L	G	R	W	K	V	G	P	G	K	P	L	F	D	A	I	L	Q	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	I	N	I	I	A	E	D	L	G
Template Known Secondary structure					.	.		S						T	G	G	G	G	T							T	T		S	S	S	S	S																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S
Template Predicted Secondary structure					.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		312	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360																			.	.	.	.	.	.	.	.	.	370	.
		507	.	.	510	.	.	.	.	.	.	.	.	.	520					.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
Predicted Secondary structure																.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	G	V	M	Q	S	D	Y	Y	R	H	G	F	D	.	.	.	.	A	M	I	N	F	D	Y	Q	E	Q	A	A	K	A	V	D	C	L	A	Q	M	D	T	T	W	Q	Q	M	A	E	K	L	Q	G	F	N	V	L	S	Y	L	S	S	H	D	T	R	L	F	R	E	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	T	E	D	V	V	Q	L	R	K	S	I	E	A	P	G	M	A	V	L	Q	F	A	F	G	S	D	A	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	L	P	H	N	H	E	Q	N	Q	V	V	Y	T	G	T	H	D	N	D	T	I	R	G	W	W	D	T	L	P	Q	E	E	K	S
Template Known Secondary structure		S												T	T							G	G	G	S	S	S	S		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	G	G	G			S	S					S			T	T	S									T	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.														.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
															572	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600					.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	D	K	A	A	E	L	L	L	L	A	P	G	A	V	Q	I	F	Y	G	D	E	S	S	R	P	F	G	.	.	.	.	P	T	G	S	D	P	L	Q	G	T	R	S	D	M	N	W	Q	D	V	S	G	K	S	A	A	S	V	A	H	W	Q	K	I	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Conservation
Template Sequence		N	V	L	K	Y	L	S	N	I	E	E	E	E	I	S	R	G	L	I	E	G	A	V	S	S	V	A	R	I	A	I	I	P	M	Q	D	V	L	G	L	G	S	D	S	R	M	N	I	P	A	T	Q	F	G	N	W	S	W	R	I	P	S	S	T	S	F	D	N	L	D	A	E	A	K	K	L	R	D	I	L
Template Known Secondary structure							T	T	S			G	G	G											T	S	S		S										T	T			G	G	G		S			T	T		S	S	S		S		B				T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
		635	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		519	520

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions