Return to main results Retrieve Phyre Job Id

Job DescriptionP25718
Confidence67.29%DateThu Jan 5 11:42:17 GMT 2012
Rank338Aligned Residues58
% Identity17%Templated1tz7a1
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   226.. .230.........240.........250.........260.........270.........280.........290.....
Predicted Secondary structure 

.












































Query SS confidence 


.


































































Query Sequence  GDL. RGLTNKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYYTQDWTNLDANMGNEADLRT
Query Conservation 


. 

  





 


 






                
    


   

  


 


 



 
Alig confidence 


.

























............




























Template Conservation 



  
   

     
    




  
............      



  
 







 
  
 
Template Sequence  GDLGKEAYRFLDFLKECGFSLWQVLPLNPT. . . . . . . . . . . . SLEAGNSPYSSNSLFAGNYVLIDPEELLE
Template Known Secondary structure 

SST





S

............
GGGTT
TTS
S
SSS

GGGS
T
Template Predicted Secondary structure 











............






















Template SS confidence 






































































   20.........30.........40......... 50.........60.........70........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions