Job Description P25718 Confidence 96.67% Date Thu Jan 5 11:42:17 GMT 2012 Rank 144 Aligned Residues 159 % Identity 14% Template c3topA_ PDB info PDB header:hydrolase/hydrolase inhibitor Chain: A: PDB Molecule:maltase-glucoamylase, intestinal; PDBTitle: crystral structure of the c-terminal subunit of human maltase-2 glucoamylase in complex with acarbose Resolution 2.88 Å

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		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		F	H	G	G	D	L	R	G	L	T	N	K	L	D	Y	L	Q	Q	L	G	.	.	V	N	A	L	W	I	S	A	P	F	E	Q	I	H	G	W	V	G	G	G	T	K	G	D	F	P	H	Y	A	Y	H	G	Y	Y	T	Q	D	W	T	N	L	D	A	N	M	G	N	E	A	D	L	R	T	L	V	D	S	A
Query Conservation																						.	.
Alig confidence																						.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Sequence		Y	G	Y	Q	N	D	S	E	I	A	S	L	Y	D	E	M	V	A	A	Q	I	P	Y	D	V	Q	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	D	Y	M	E	R	Q	L	D	F	T	L	S	P	K	F	A	.	.	.	G	F	P	A	L	I	N	R	M
Template Known Secondary structure		T	T			S															T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S	S	T	T		T	T				G	G	G	T	.	.	.	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template SS confidence
		1251	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.																							.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.				.	.	.	1300	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.				.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		H	Q	R	G	I	R	I	L	F	D	V	.	.	.	V	M	N	H	T	G	Y	A	T	L	A	D	M	Q	E	Y	Q	F	G	A	L	Y	L	S	G	D	E	V	K	K	S	L	G	E	R	W	S	D	W	K	P	A	A	G	Q	T	W	H	S	F	N	D	Y	I	N	F	S	D	K	T	G	W	D	K	W	W
Query Conservation													.	.	.
Alig confidence													.	.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	D	G	M	R	V	I	L	I	L	D	P	A	I	S	G	N	E	T	Q	P	Y	P	A	F	T	R	G	V	E	D	D	V	F	I	K	Y	P	N	D	G	D	I	V	W	G	K	V	W	P	D	F	P	D	V	V	V	N	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T									S								S												T		B		B		S	S	S			B										S	S					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1306	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		G	K	N	W	I	R	T	D	I	G	D	Y	D	N	P	G	F	D	D	L	T	M	S	L	A	F	L	P	D	I	K	T	E	S	T	T	A	S	G	L	P	V	F	Y	K	N	K	M	D	T	H	A	K	A	I	D	G	Y	T	P	R	D	Y	L	T	H	W	L	S	Q	W	V	R	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	L	D	W	D	S	Q	V	E	L	Y	R	A	Y	V	A	F	P	D	F	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	S	T	A	K	W	W	K	R	E	I	E	E	L	Y	N	N	P	Q	N	P	E	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	S									T							B		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																S		S	S		G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													1367	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.																										.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410
		451	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	G	I	D	G	F	R	V	D	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	K	F	D	G	M	W	I	D	M
Template Known Secondary structure						S						S
Template Predicted Secondary structure
Template SS confidence
		1411	.	.	.	.	.	.	.	.	1420	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions