 |
Job Description | P25718 | Confidence | 59.13% | Date | Thu Jan 5 11:42:17 GMT 2012 |
Rank | 388 | Aligned Residues | 50 |
% Identity | 14% | Template | c3lrmB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:alpha-galactosidase 1; |
PDBTitle: structure of alfa-galactosidase from saccharomyces cerevisiae with2 raffinose
|
Resolution | 2.70 Å |
|
 |
  |   |
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Q | Q | L | G | V | N | A | L | W | I | S | A | P | F | E | Q | I | H | G | W | V | G | G | G | T | K | G | D | F | P | H | Y | A | Y | H | G | Y | Y | T | Q | D | W | T | N | L | D | A | N | M | G | N | E | A | D | L | R | T | L | V | D | S | A | H | Q | R | G | I | R | I |
Query Conservation |   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |   |   |
|
|   |   |
|
|
|   |
|
|
|   |
|
|
|
|   |
|
|   |   |
|
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|   |
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|   |   |   |
|
|   |   |
|   |   |   |   |
| . | . | . | . |   |   |
|
|
|   | . | . |
|
|
|   |
|
|
|   |
|
|   |   |
|
|
|   |
Template Sequence |   |
L | K | D | M | G | Y | K | Y | I | I | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | D | C | W | S | S | G | R | D | S | D | G | F | L | V | A | D | . |
. |
. |
. |
E | Q | K | F | P | N | . |
. |
G | M | G | H | V | A | D | H | L | H | N | N | S | F | L | F |
Template Known Secondary structure |   |
| G | G | G | T |
|
|  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| S | S |
|  |  |  |  |
| T | T | S |
|  |  |  |
| . | . | . | . | T | T | T |
| T | T | . | . |
|  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
Template Predicted Secondary structure |   |
|  |  |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
| . | . | . | . |
|
|
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
61 | . | . | . | . | . | . | . | . | 70 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
|
|
|
. | 90 | . | . | . | . | |
|
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|