 |
Job Description | P25718 | Confidence | 79.13% | Date | Thu Jan 5 11:42:17 GMT 2012 |
Rank | 277 | Aligned Residues | 67 |
% Identity | 24% | Template | c3itcA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:renal dipeptidase; |
PDBTitle: crystal structure of sco3058 with bound citrate and glycerol
|
Resolution | 1.70 Å |
|
 |
  |   |
232 | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | |
. | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | N | K | L | D | Y | L | Q | Q | L | G | V | N | A | L | W | I | S | A | P | F | E | Q | I | H | G | W | V | G | G | G | T | K | G | D | F | P | H | Y | A | Y | H | G | Y | Y | T | Q | D | W | T | N | L | D | A | N | M | G | N | E | A | D | L | . |
R | T | L | V | D | S | A | H | Q | R | G | I | R | I | L | F | D |
Query Conservation |   |
  |   |
|
|
|
|
|
|   |
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |   |   |
|
|   |   |
|
|
|   |
|
|
|   |
|
|
| . |
|   |
|
|   |   |
|
|   |
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|   |   |
|
|
|   |   |   |
|
|
|
|   |   |
|   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|
|   |   |
|
|   |
|
|   |
|
|
|
|
|
|
| . | . |
|
|
|
Template Sequence |   |
L | A | T | L | R | A | L | Y | A | L | G | V | R | Y | M | T | L | T | H | N | D | N | N | A | W | A | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | A | T | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
E | P | G | V | G | G | L | S | A | F | G | R | E | V | V | R | E | M | N | R | E | G | M | . |
. |
L | V | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  | S |
| S | S | S |
| B | T | T | B |
| . | . | . | . | . | . | . | . | . | . | . | . | B | T | T | S | . | . | . | . | . | . | . | . | . |
|
| S | S | S | S | B |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| . | . |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
132 | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | 160 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | |
|
. | . | . |
  |
  |   |
311 | . | . | . | . | . | . | . | . | 320 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | M | N | H | T | G | Y | A | T | L | A | D |
Query Conservation |   |
  |
|   |
|
|
|
|   |   |   |   |   |   |
Alig confidence |   |
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
| . | . |
|
|   |
|   |   |
|   |   |
|
Template Sequence |   |
L | . |
. |
S | H | V | A | A | T | T | M | R | D |
Template Known Secondary structure |   |
| . | . | T | T | B |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 | . | . |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
189 | |
|
190 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|