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Job DescriptionP25718
Confidence100.00%DateThu Jan 5 11:42:17 GMT 2012
Rank51Aligned Residues387
% Identity20%Templatec3czkA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:sucrose hydrolase; PDBTitle: crystal structure analysis of sucrose hydrolase(suh) e322q-2 sucrose complex
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   188.190.........200.........210.........220.........230.........240.........250.........260.......
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Query Sequence  NATVYFVLTDRFENGDPSNDQSYGRHKDGMAEIGTFHGGDLRGLTNKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDF
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Template Sequence  HMLGYSAYADRF. . . . . . . . . . . . . . . . . . . . . . . . . AGTLQGVAERVPYLQELGVRYLHLLPFLRARAGD. . . . . . . . .
Template Known Secondary structure  T


.........................SSTT
S



SS
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   90.........100. ........110.........120.........130.....
 
   268.270.........280.........290.........300.........310.........320.........330.........340.......
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Query Sequence  PHYAYHGYYTQDWTNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYLSGDEVKKSLGERW
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Template Sequence  . . . NDGGFAVSDYGQVEPSLGSNDDLVALTSRLREAGISLCADFVLNHTADDHAWAQAARAGDARYL. . . . . . . . . . . DY
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TTTTS
TTT

TT



STTSTT
...........TT
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   136...140.........150.........160.........170.........180.........190......... 200.
 
   348.350.........360.........370.........380.........390.........400.........410.........420.......
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Query Sequence  SDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNPGFDDLTMSLAFLPDIKTESTTASGLPVFYKNKMDT
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Template Sequence  YHHFADRTVPDRYEATLGQ. . . . . . . . . . VFPHTAPGNFTWVDDTAQWMWTTFYPYQWDLNWS. . . . . . . . . . . . . . . . .
Template Known Secondary structure  B
SSS


..........SBTTTB

STTTT
SSSTTB
TT.................
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   202.......210.........220 .........230.........240.........250....
 
   428.430.........440.........450.........460..... ....470.........480.........490....
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Query Sequence  HAKAIDGYTPRDYLTHWLSQWVRDYGIDGFRVDTAKHV. . . . . . . . . . . . . ELPAWQQLKTEASAALREWKKANPDKALD
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Template Sequence  . . . . . . NPAVFGDMALAMLRLA. NLGVEAFRLDSTAYLWKRIGTDCMNQSEAHTLLVALRAVTDIV. . . . . . . . . . . . . .
Template Known Secondary structure  ......S.TT

TTTTSS


TTS
SSS
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   255....260.........270 .........280.........290.........300.........310...
 
   495....500.........510..... ....520.........530....... ..540.........550.........560.....
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Query Sequence  DKPFWMTGEAWGHGVMQSDYY. . . . . . RHGFDAMINFDYQEQAAKAVDC. . LAQMDTTWQQMAEKLQGFNVLSYLSSHD.
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Template Sequence  APAVVMKAQAIVPMTQLPPYFGSGVDEGHECHLAYHSTLMAAGWSALALQRGDILHNVIAHSPPLPRHCAWLSYVRCHDD
Template Known Secondary structure 
TT





GGGSGGGG

GGGTTSS
S
T
TTS



TT
S

SS
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   314.....320.........330.........340.........350.........360.........370.........380.........390...
 
   566...570......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TRLFREGGDKA
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Template Conservation                                                                                
 
Template Sequence  IGWNVLQHEACGNAAQPPFSLRDVARFYANAVPGSYARGESFQGVHGTNGMAAALAGIQAAQEAGDAAALAVAVDRLVLL
Template Known Secondary structure  GGGGT

SSS



T
STT










TTTT
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   394.....400.........410.........420.........430.........440.........450.........460.........470...
 
   577..580.........590.........600 .........610...... ...620.........630.........640...
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Query Sequence  AELLLLAPGAVQIFYGDESSRPFG. . . . . . . PTGSDPLQGTRSDMNW. . . . . . QDVSGKSAASVAHWQKISQFRARHPAI
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Template Sequence  YAIALAMPGVPLIYMGDELAMVNDPGYRDDPHRQHEGRWLHRPAMDWQLAAQRHDAKSLSGTVYRRLRGLIRQRAALGAL
Template Known Secondary structure  SSTTGGGT



GGGGG
TTTTT
GGGGG




TTS
TTST
GGG
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   478.480.........490.........500.........510.........520.........530.........540.........550.......
 
   644.....650..... ....660.........670...
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Query Sequence  GAGKQTTLLLKQ. . . GYGFVREHGDDKVLVVWA
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Template Sequence  AADQALASIALNDPRVFALTR. . . GDSFIALHN
Template Known Secondary structure  STTS



S
TT...TTT
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   558.560.........570........ .580.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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