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Job DescriptionP25718
Confidence98.70%DateThu Jan 5 11:42:17 GMT 2012
Rank109Aligned Residues307
% Identity14%Templatec2yfnA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha-galactosidase-sucrose kinase agask; PDBTitle: galactosidase domain of alpha-galactosidase-sucrose kinase,2 agask
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   227..230.........240.........250.........260.........270.........280.........290.........300......
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Query Sequence  DLRGLTNKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYYTQDWTNLDANMGNEADLRTLVDSAHQRGIR
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Template Sequence  TGDTIVDLAKEAASLGIDMVVM. . . . . . . . . . . . . . DDGWFGKRNDDNSSLGDWQVNETKLGG. . SLAELITRVHEQGMK
Template Known Secondary structure 
TTT

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SSSBTT
SSTTS
TT

SB
TS..
TT
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   344.....350.........360..... ....370.........380.........390.. .......400.......
 
   307..310.........320.........330.........340.........350.........360.........370.........380......
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Query Sequence  ILFDVVMNHTGYATLADMQEYQFGALYLSGDEVKKSLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDI
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Template Sequence  FGIWIEPEMINEDSDLYRAHPDWAIRIQGKKPVRSRNQLL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
TT
SSS
GGGB


TTS



BTTB........................................
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   408.410.........420.........430.........440.......
 
   387..390.........400.........410.........420.........430.........440.........450.........460......
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Query Sequence  GDYDNPGFDDLTMSLAFLPDIKTESTTASGLPVFYKNKMDTHAKAIDGYTPRDYLTHWLSQWVRDYGIDGFRVDTAKHVE
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LDFSRKEVRDCVFDQICVVLDQGKIDYVKWDMNRSMA
Template Known Secondary structure  ...........................................B
TT
TTS





S


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   448.450.........460.........470.........480....
 
   467..470.........480.........490.........500.........510... ......520.........530.........540....
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Query Sequence  LPAWQQLKTEASAALREWKKANPDKALDDKPFWMTGEAWGHGVMQSD. . YYRHGFDAMINFDYQEQAAKAVDCLAQMDTT
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Template Sequence  DVYAGNLSYDYVLGVYDFMERLCSR. . . YPDLLLEGCSGGGGRFDAGMLYYSPQIWCSDNTDAINRTR. . . . . . . . IQYG
Template Known Secondary structure  S

STT...
TT

BTBBTT
STT
S
BS


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   485....490.........500......... 510.........520.........530.........540......... 550...
 
   545....550.........560.........570.........580.........590.........600.........610.........620....
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Query Sequence  WQQMAEKLQGFNVLSYLSSHDTRLFREGGDKAAELLLLAPGAVQIFYGDESSRPFGPTGSDPLQGTRSDMNWQDVSGKSA
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Template Sequence  TSFFYPVSAMGAHVSAVPNHQTGRVTSFHTRGVTAMAGTFGY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . ELNPALLSD
Template Known Secondary structure  TTTS
GGG


SS
TTT




TTTT

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GGGS
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   554.....560.........570.........580.........590..... ....600....
 
   625....630.........640 .........650..... ....660.........670..
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Query Sequence  ASVAHWQKISQFRARH. PAIGAGKQTTLLLKQ. . . . . GYGFVREHGDDKVLVVW
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Template Sequence  EEKQQIREQIKTYKKYETLINEGTYWRLSDPFTDEIAAWMSVSEEQDHALVSVV
Template Known Secondary structure  S
S
TTTSS
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   605....610.........620.........630.........640.........650........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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