Return to main results Retrieve Phyre Job Id

Job DescriptionP25718
Confidence100.00%DateThu Jan 5 11:42:17 GMT 2012
Rank70Aligned Residues373
% Identity22%Templatec1wpcA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glucan 1,4-alpha-maltohexaosidase; PDBTitle: crystal structure of maltohexaose-producing amylase complexed with2 pseudo-maltononaose
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   225....230.........240.........250.........260.........270.........280 .........290.....
Predicted Secondary structure 






































.........








Query SS confidence 























































. . . . . . . . .














Query Sequence  GGDLRGLTNKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYYTQDW. . . . . . . . . TNLDANMGNEADLRT
Query Conservation 



 

  





 


 






                
    


   

.........  


 


 



 
Alig confidence 





























.............












.........














Template Conservation        
  




  







 

   .............      

   
 
          
    

  

  
Template Sequence  GNHWNRLNSDASNLKSKGITAVWIPPAWKG. . . . . . . . . . . . . ASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQA
Template Known Secondary structure  S
T




S.............SSTT

S
STT
SS
S
BTTBSS
SS

Template Predicted Secondary structure 











.............






























Template SS confidence 















































































   21........30.........40.........50 .........60.........70.........80.......
 
   296...300.........310.........320.........330.........340.........350.........360.........370.....
Predicted Secondary structure 































































Query SS confidence 















































































Query Sequence  LVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYLSGDEVKKSLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDK
Query Conservation 

  

 







 
 



                                                          
Alig confidence 


























..






























....















Template Conservation 

  

  

 





 

       ..                               ....                
Template Sequence  AVTSLKNNGIQVYGDVVMNHKGGADAT. . EMVRAVEVNPNNRNQEVTGEYTIEAWTRFDF. . . . PGRGNTHSSFKWRWYH
Template Known Secondary structure  TT


S
S
S..TT
S

B

....TTTTTSS



B
GGG
Template Predicted Secondary structure 











..






























....















Template SS confidence 















































































   88.90.........100.........110.... .....120.........130.........140..... ....150.........160.
 
   376...380.... .....390.........400.........410.........420.........430.........440..
Predicted Secondary structure 








.............

















































Query SS confidence 








. . . . . . . . . . . . .

























































Query Sequence  WWGKNWIRT. . . . . . . . . . . . . DIGDYDNPGFDDLTMSLAFLPDIKTESTTASGLPVFYKNKMDTHAKAIDGYTPRDYLT
Query Conservation    
 
    .............                   




                         
  
   
 
Alig confidence 








.............

























.......................








Template Conservation                                           
 


  .......................
  
     
Template Sequence  FDGVDWDQSRRLNNRIYKFRGHGKAWDWEVDTENGNYDYLMYADIDMD. . . . . . . . . . . . . . . . . . . . . . . HPEVVNELR
Template Known Secondary structure  S

TTT

SS

STT



SS


TTS




SS
TT.......................
Template Predicted Secondary structure 















































.......................
Template SS confidence 















































































   162.......170.........180.........190.........200......... 210........
 
   443......450.........460.........470.........480.........490.........500.........510..... ....
Predicted Secondary structure 
















...



Query SS confidence 








































































. . .



Query Sequence  HWLSQWVRDYGIDGFRVDTAKHVELPAWQQLKTEASAALREWKKANPDKALDDKPFWMTGEAWGHGVMQSDYY. . . RHGF
Query Conservation       

   







 
  
   

                               

            ...  
 
Alig confidence 






































.............




















...



Template Conservation       
    








   
           
    .............       

                   
Template Sequence  NWGVWYTNTLGLDGFRIDAVKHIKYSFTRDWINHVRSAT. . . . . . . . . . . . . GKNMFAVAEFWKNDLGAIENYLQKTNWN
Template Known Secondary structure  T
STTGGGS
.............T






S
TTT
Template Predicted Secondary structure 









.............












Template SS confidence 















































































   219220.........230.........240.........250....... ..260.........270.........280.....
 
   520.........530..... ....540.........550.........560.........570. ........580........
Predicted Secondary structure 

..







.........


Query SS confidence 















. .



































. . . . . . . . .
















Query Sequence  DAMINFDYQEQAAKAV. . DCLAQMDTTWQQMAEKLQGFNVLSYLSSHDTRLFRE. . . . . . . . . GGDKAAELLLLAPGAVQ
Query Conservation 
   

          ..                        

 


  
   .........
   
   


 



 
Alig confidence 















..



































.........
















Template Conservation      

 
   
           
                
 

 


  
              

 
 

 
  


 
Template Sequence  HSVFDVPLHYNLYNASKSGGNYDMRNIFNGTVVQRHPSHAVTFVDNHDSQPEEALESFVEEWFKPLAYALTLTREQGYPS
Template Known Secondary structure  S
TTTT
S
GGGTTTT

GGG
S

TTTSTTSTT




TTTSSSSS
Template Predicted Secondary structure 


























Template SS confidence 















































































   286...290.........300.........310.........320.........330.........340.........350.........360.....
 
   589590.........600.........610.........620.........630.........640.........650. ........660.......
Predicted Secondary structure 
































.



Query SS confidence 






























































.















Query Sequence  IFYGDESSRPFGPTGSDPLQGTRSDMNWQDVSGKSAASVAHWQKISQFRARHPAIGAGKQTTL. LLKQGYGFVREHGDDK
Query Conservation 







        
     
  
 
         
   



  


  


  
    
.      

 
   

 
Alig confidence 















.....................
















...





.















Template Conservation 





 
        .....................       
  


    ...
          
 

 
      
Template Sequence  VFYGDYYGIPTHGVPA. . . . . . . . . . . . . . . . . . . . . MRSKIDPILEARQKYAY. . . GKQNDYLDHHNIIGWTREGNTAH
Template Known Secondary structure 
BGGGTB

.....................
T

...S


SSS


TTS
Template Predicted Secondary structure 









.....................


...








Template SS confidence 















































































   366...370.........380. ........390........ .400.........410.........420.
 
   668.670......
Predicted Secondary structure  .....



Query SS confidence  . . . . .








Query Sequence  . . . . . VLVVWAGQQ
Query Conservation  .....



     
Alig confidence  .....








Template Conservation        

  
   
Template Sequence  PNSGLATIMSDGAG
Template Known Secondary structure  TT

SSS
Template Predicted Secondary structure 






Template SS confidence 













   422.......430.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions