Job Description P0A776 Confidence 99.80% Date Thu Jan 5 11:05:00 GMT 2012 Rank 37 Aligned Residues 131 % Identity 15% Template c3gz8C_ PDB info PDB header:dna binding protein Chain: C: PDB Molecule:mutt/nudix family protein; PDBTitle: cocrystal structure of nudix domain of shewanella oneidensis2 nrtr complexed with adp ribose Resolution 2.43 Å

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		6	.	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.														.	.	.														.	.
Query SS confidence													.	.	.														.	.	.														.	.
Query Sequence		G	Y	R	P	N	V	G	I	V	I	C	.	.	.	N	R	Q	G	Q	V	M	W	A	R	R	F	G	.	.	.	Q	H	S	W	Q	F	P	Q	G	G	I	N	P	.	.	G	E	S	A	E	Q	A	M	Y	R	E	L	F	E	E	V	G	L	S	R	K	D	V	R	I	L	A	S	T	R	N	W	L	R	Y
Query Conservation													.	.	.														.	.	.														.	.
Alig confidence													.	.	.														.	.	.														.	.																																		.	.
Template Conservation																																																																																.	.
Template Sequence		A	Q	L	L	T	V	D	A	V	L	F	T	Y	H	D	Q	Q	L	K	V	L	L	V	Q	R	S	N	H	P	F	L	G	L	W	G	L	P	G	G	F	I	D	E	T	C	D	E	S	L	E	Q	T	V	L	R	K	L	A	E	K	T	A	V	V	P	P	Y	I	E	Q	L	C	T	V	G	N	N	S	.	.
Template Known Secondary structure																T	T										S	S	S	S	S	T	T											T	T	T		S	S																		S											S	S	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	P	K	R	L	V	R	W	D	T	K	P	V	C	I	G	Q	K	Q	K	W	F	L	L	Q	L	V	S	G	D	A	E	I	N	M	Q	T	S	S	T	P	E	F	D	G	W	R	W	V	S	Y	W	Y	P	V	R	Q	V	V	S	F	K	R	D	V	Y	R	R	V	M	K	E	F	A	S	V	V	M	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.																							.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.																							.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	R	D	A	R	G	W	S	V	T	V	C	Y	T	A	L	M	S	Y	Q	A	C	Q	I	.	.	.	.	.	Q	I	A	S	V	S	D	V	K	W	W	P	L	A	D	V	L	Q	M	P	L	A	.	.	.	F	D	H	L	Q	L	I	E	Q	A	R	E	R	L	T	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	S		T	T	S	S																		.	.	.	.	.		S	T	T													T	T	S		B	S	.	.	.	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.																							.	.	.
Template SS confidence
													95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.						.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions