Job Description P0A776 Confidence 99.53% Date Thu Jan 5 11:05:00 GMT 2012 Rank 76 Aligned Residues 115 % Identity 16% Template c2pnyA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:isopentenyl-diphosphate delta-isomerase 2; PDBTitle: structure of human isopentenyl-diphosphate delta-isomerase 2 Resolution 1.81 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.
Predicted Secondary structure																										.	.	.	.	.					.													.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Query SS confidence																										.	.	.	.	.					.													.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Query Sequence		G	Y	R	P	N	V	G	I	V	I	C	N	R	Q	G	Q	V	M	W	A	R	R	F	G	.	.	.	.	.	Q	H	S	W	.	Q	F	P	Q	G	G	I	N	P	G	E	S	.	.	.	.	.	.	.	.	.	A	E	Q	A	M	Y	R	E	L	F	E	E	V	G	L	S	R	K	.	.	.	.	.	D	V
Query Conservation																										.	.	.	.	.					.													.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Alig confidence																										.	.	.	.	.					.													.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Conservation
Template Sequence		L	L	H	R	A	F	S	V	V	L	F	N	T	K	N	R	I	L	I	Q	Q	R	S	D	T	K	V	T	F	P	G	Y	F	T	D	S	C	S	S	H	P	L	Y	N	P	A	E	L	E	E	K	D	A	I	G	V	R	R	A	A	Q	R	R	L	Q	A	E	L	G	I	P	G	E	Q	I	S	P	E	D	I
Template Known Secondary structure														T	T										T	T		S	S	S	T	T		B			S						B	S	S							G	G	G																			T	T	T			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	L	A	S	T	R	N	W	L	R	Y	K	L	P	K	R	L	V	R	W	D	T	K	P	V	C	I	G	Q	K	Q	K	W	F	L	L	Q	L	V	S	G	D	A	E	I	N	M	Q	T	S	S	T	P	E	F	D	G	W	R	W	V	S	Y	W	Y	P	V	R	Q	V
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Sequence		V	F	M	T	I	Y	H	H	K	A	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	I	W	G	E	H	E	I	C	Y	L	L	L	V	R	K	N	V	T	L	N	P	D	P	S	.	.	.	E	T	K	S	I	L	Y	L	S	Q	E	E	L	W	E	L	L
Template Known Secondary structure													S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S	B																					T	T	.	.	.	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140														.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.				.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions