Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	S	L	I	N	T	K	I	K	P	F	K	N	Q	A	F	K	N	G	E	F	I	E	I	T	E	K	D	T	E	G	R	W	S	V	F	F	F	Y	P	A	D	F	T	F	V	C	P	T	E	L	G	D	V	A	D	H	Y	E	E
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		L	Q	K	L	G	V	D	V	Y	A	V	S	T	D	T	H	F	T	H	K	A	W	H	S	S	S	E	T	I	A	K	I	K	Y	A	M	I	G	D	P	T	G	A	L	T	R	N	F	D	N	M	R	E	D	E	G	L	A	D	R
Secondary structure
SS confidence
Disorder																											?
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		A	T	F	V	V	D	P	Q	G	I	I	Q	A	I	E	V	T	A	E	G	I	G	R	D	A	S	D	L	L	R	K	I	K	A	A	Q	Y	V	A	S	H	P	G	E	V	C	P	A	K	W	K	E	G	E	A	T	L	A	P	S
Secondary structure
SS confidence
Disorder																																																									?		?	?
Disorder confidence
		.	.	.	.	.	.	.
Sequence		L	D	L	V	G	K	I
Secondary structure
SS confidence
Disorder					?	?	?	?
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 1n8j chain A Region: 2 - 187 Aligned: 186 Modelled: 186 Confidence: 100.0% Identity: 98% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Glutathione peroxidase-like Phyre2 PDB 1qmv chain A Region: 1 - 186 Aligned: 184 Modelled: 186 Confidence: 100.0% Identity: 36% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Glutathione peroxidase-like Phyre2 PDB 1uul chain A Region: 4 - 186 Aligned: 182 Modelled: 183 Confidence: 100.0% Identity: 35% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Glutathione peroxidase-like Phyre2 PDB 1xcc chain A Region: 2 - 186 Aligned: 182 Modelled: 185 Confidence: 100.0% Identity: 25% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Glutathione peroxidase-like Phyre2 PDB 2v2g chain C Region: 2 - 186 Aligned: 180 Modelled: 185 Confidence: 100.0% Identity: 29% PDB header:oxidoreductase Chain: C: PDB Molecule:peroxiredoxin 6; PDBTitle: crystal structure of the c45s mutant of the peroxiredoxin 62 of arenicola marina. monoclinic form Phyre2 PDB 1prx chain A Region: 2 - 181 Aligned: 174 Modelled: 180 Confidence: 100.0% Identity: 28% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Glutathione peroxidase-like Phyre2 PDB 2zct chain A domain 1 Region: 2 - 181 Aligned: 171 Modelled: 180 Confidence: 100.0% Identity: 33% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Glutathione peroxidase-like Phyre2 PDB 1yex chain A domain 1 Region: 2 - 167 Aligned: 166 Modelled: 166 Confidence: 100.0% Identity: 98% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Glutathione peroxidase-like Phyre2 PDB 2h01 chain A domain 1 Region: 7 - 173 Aligned: 165 Modelled: 167 Confidence: 100.0% Identity: 35% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Glutathione peroxidase-like Phyre2 PDB 1zof chain B Region: 3 - 172 Aligned: 168 Modelled: 170 Confidence: 100.0% Identity: 31% PDB header:oxidoreductase Chain: B: PDB Molecule:alkyl hydroperoxide-reductase; PDBTitle: crystal structure of alkyl hydroperoxide-reductase (ahpc)2 from helicobacter pylori Phyre2 PDB 1we0 chain A domain 1 Region: 2 - 166 Aligned: 165 Modelled: 165 Confidence: 100.0% Identity: 62% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Glutathione peroxidase-like Phyre2 PDB 2bmx chain B Region: 1 - 171 Aligned: 165 Modelled: 170 Confidence: 100.0% Identity: 32% PDB header:oxidoreductase Chain: B: PDB Molecule:alkyl hydroperoxidase c; PDBTitle: mycobacterium tuberculosis ahpc Phyre2 PDB 2c0d chain A Region: 3 - 167 Aligned: 163 Modelled: 165 Confidence: 100.0% Identity: 29% PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin peroxidase 2; PDBTitle: structure of the mitochondrial 2-cys peroxiredoxin from2 plasmodium falciparum Phyre2 PDB 2h66 chain G Region: 2 - 168 Aligned: 165 Modelled: 167 Confidence: 100.0% Identity: 30% PDB header:structural genomics/oxidoreductase Chain: G: PDB Molecule:pv-pf14_0368; PDBTitle: the crystal structure of plasmodium vivax 2-cys2 peroxiredoxin Phyre2 PDB 1qq2 chain A Region: 1 - 168 Aligned: 167 Modelled: 168 Confidence: 100.0% Identity: 36% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Glutathione peroxidase-like Phyre2 PDB 1e2y chain A Region: 2 - 161 Aligned: 160 Modelled: 160 Confidence: 100.0% Identity: 31% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Glutathione peroxidase-like Phyre2 PDB 1zye chain L Region: 2 - 160 Aligned: 159 Modelled: 159 Confidence: 100.0% Identity: 37% PDB header:oxidoreductase Chain: L: PDB Molecule:thioredoxin-dependent peroxide reductase; PDBTitle: crystal strucutre analysis of bovine mitochondrial peroxiredoxin iii Phyre2 PDB 2bmx chain A domain 1 Region: 1 - 157 Aligned: 156 Modelled: 157 Confidence: 100.0% Identity: 32% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Glutathione peroxidase-like Phyre2 PDB 1zof chain A domain 1 Region: 2 - 167 Aligned: 164 Modelled: 166 Confidence: 100.0% Identity: 31% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Glutathione peroxidase-like Phyre2 PDB 1zye chain A domain 1 Region: 6 - 160 Aligned: 155 Modelled: 155 Confidence: 100.0% Identity: 38% Fold: Thioredoxin fold Superfamily: Thioredoxin-like Family: Glutathione peroxidase-like Phyre2 1 d1n8ja_ 2 d1qmva_ 3 d1uula_ 4 d1xcca_ 5 c2v2gC_ 6 d1prxa_ 7 d2zcta1 8 d1yexa1 9 d2h01a1 10 c1zofB_ 11 d1we0a1 12 c2bmxB_ 13 c2c0dA_ 14 c2h66G_ 15 d1qq2a_ 16 d1e2ya_ 17 c1zyeL_ 18 d2bmxa1 19 d1zofa1 20 d1zyea1 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1n8ja_ 100.0 98 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 2 d1qmva_ 100.0 36 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 3 d1uula_ 100.0 35 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 4 d1xcca_ 100.0 25 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 5 c2v2gC_ 100.0 29 PDB header:oxidoreductase Chain: C: PDB Molecule:peroxiredoxin 6; PDBTitle: crystal structure of the c45s mutant of the peroxiredoxin 62 of arenicola marina. monoclinic form 6 d1prxa_ 100.0 28 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 7 d2zcta1 100.0 33 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 8 d1yexa1 100.0 98 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 9 d2h01a1 100.0 35 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 10 c1zofB_ 100.0 31 PDB header:oxidoreductase Chain: B: PDB Molecule:alkyl hydroperoxide-reductase; PDBTitle: crystal structure of alkyl hydroperoxide-reductase (ahpc)2 from helicobacter pylori 11 d1we0a1 100.0 62 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 12 c2bmxB_ 100.0 32 PDB header:oxidoreductase Chain: B: PDB Molecule:alkyl hydroperoxidase c; PDBTitle: mycobacterium tuberculosis ahpc 13 c2c0dA_ 100.0 29 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin peroxidase 2; PDBTitle: structure of the mitochondrial 2-cys peroxiredoxin from2 plasmodium falciparum 14 c2h66G_ 100.0 30 PDB header:structural genomics/oxidoreductase Chain: G: PDB Molecule:pv-pf14_0368; PDBTitle: the crystal structure of plasmodium vivax 2-cys2 peroxiredoxin 15 d1qq2a_ 100.0 36 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 16 d1e2ya_ 100.0 31 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 17 c1zyeL_ 100.0 37 PDB header:oxidoreductase Chain: L: PDB Molecule:thioredoxin-dependent peroxide reductase; PDBTitle: crystal strucutre analysis of bovine mitochondrial peroxiredoxin iii 18 d2bmxa1 100.0 32 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 19 d1zofa1 100.0 31 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 20 d1zyea1 100.0 38 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 21 c2ywiA_ not modelled 100.0 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical conserved protein; PDBTitle: crystal structure of uncharacterized conserved protein from2 geobacillus kaustophilus 22 d2cv4a1 not modelled 100.0 34 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 23 d2cvba1 not modelled 100.0 10 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 24 c3kebB_ not modelled 100.0 7 PDB header:oxidoreductase Chain: B: PDB Molecule:probable thiol peroxidase; PDBTitle: thiol peroxidase from chromobacterium violaceum 25 d1xvwa1 not modelled 100.0 26 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 26 c3umaC_ not modelled 100.0 17 PDB header:oxidoreductase Chain: C: PDB Molecule:hypothetical peroxiredoxin protein; PDBTitle: crystal structure of a hypothetical peroxiredoxin protein frm2 sinorhizobium meliloti 27 d1nm3a2 not modelled 100.0 21 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 28 c2wfcD_ not modelled 100.0 22 PDB header:oxidoreductase Chain: D: PDB Molecule:peroxiredoxin 5; PDBTitle: crystal structure of peroxiredoxin 5 from arenicola marina 29 d1hd2a_ not modelled 100.0 26 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 30 c3gknA_ not modelled 100.0 24 PDB header:oxidoreductase Chain: A: PDB Molecule:bacterioferritin comigratory protein; PDBTitle: insights into the alkyl peroxide reduction activity of xanthomonas2 campestris bacterioferritin comigratory protein from the trapped3 intermediate/ligand complex structures 31 d1tp9a1 not modelled 100.0 21 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 32 c2jszA_ not modelled 100.0 18 PDB header:oxidoreductase Chain: A: PDB Molecule:probable thiol peroxidase; PDBTitle: solution structure of tpx in the reduced state 33 c2xhfA_ not modelled 100.0 15 PDB header:oxidoreductase Chain: A: PDB Molecule:peroxiredoxin 5; PDBTitle: crystal structure of peroxiredoxin 5 from alvinella pompejana 34 d1psqa_ not modelled 99.9 20 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 35 c2yzhD_ not modelled 99.9 20 PDB header:oxidoreductase Chain: D: PDB Molecule:probable thiol peroxidase; PDBTitle: crystal structure of peroxiredoxin-like protein from aquifex aeolicus 36 c3ixrA_ not modelled 99.9 22 PDB header:oxidoreductase Chain: A: PDB Molecule:bacterioferritin comigratory protein; PDBTitle: crystal structure of xylella fastidiosa prxq c47s mutant 37 d2cx4a1 not modelled 99.9 25 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 38 d1xiya1 not modelled 99.9 17 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 39 c2xpdC_ not modelled 99.9 21 PDB header:oxidoreductase Chain: C: PDB Molecule:thiol peroxidase; PDBTitle: reduced thiol peroxidase (tpx) from yersinia pseudotuberculosis 40 d1xvqa_ not modelled 99.9 18 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 41 c2hyxA_ not modelled 99.9 19 PDB header:unknown function Chain: A: PDB Molecule:protein dipz; PDBTitle: structure of the c-terminal domain of dipz from mycobacterium2 tuberculosis 42 d1qxha_ not modelled 99.9 20 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 43 d1q98a_ not modelled 99.9 17 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 44 c2pwjB_ not modelled 99.9 19 PDB header:oxidoreductase Chain: B: PDB Molecule:mitochondrial peroxiredoxin; PDBTitle: structure of a mitochondrial type ii peroxiredoxin from2 pisum sativum 45 c3drnB_ not modelled 99.9 25 PDB header:oxidoreductase Chain: B: PDB Molecule:peroxiredoxin, bacterioferritin comigratory protein PDBTitle: the crystal structure of bcp1 from sulfolobus sulfataricus 46 c3hdcA_ not modelled 99.9 19 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin family protein; PDBTitle: the crystal structure of thioredoxin protein from geobacter2 metallireducens 47 d2a4va1 not modelled 99.9 18 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 48 c2ywnA_ not modelled 99.9 23 PDB header:oxidoreductase Chain: A: PDB Molecule:peroxiredoxin-like protein; PDBTitle: crystal structure of peroxiredoxin-like protein from2 sulfolobus tokodaii 49 d1jfua_ not modelled 99.9 17 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 50 d2b7ka1 not modelled 99.9 15 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 51 c3gl3D_ not modelled 99.9 20 PDB header:oxidoreductase Chain: D: PDB Molecule:putative thiol:disulfide interchange protein PDBTitle: crystal structure of a putative thiol:disulfide interchange2 protein dsbe from chlorobium tepidum 52 c3kcmC_ not modelled 99.9 16 PDB header:oxidoreductase Chain: C: PDB Molecule:thioredoxin family protein; PDBTitle: the crystal structure of thioredoxin protein from geobacter2 metallireducens 53 c3kh7A_ not modelled 99.9 20 PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbe; PDBTitle: crystal structure of the periplasmic soluble domain of reduced ccmg2 from pseudomonas aeruginosa 54 c3ha9A_ not modelled 99.9 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized thioredoxin-like protein; PDBTitle: the 1.7a crystal structure of a thioredoxin-like protein from2 aeropyrum pernix 55 c2l5oA_ not modelled 99.9 15 PDB header:oxidoreductase Chain: A: PDB Molecule:putative thioredoxin; PDBTitle: solution structure of a putative thioredoxin from neisseria2 meningitidis 56 c2b1kA_ not modelled 99.9 17 PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbe; PDBTitle: crystal structure of e. coli ccmg protein 57 d1lu4a_ not modelled 99.9 11 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 58 c3hczA_ not modelled 99.9 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:possible thiol-disulfide isomerase; PDBTitle: the crystal structure of a domain of possible thiol-disulfide2 isomerase from cytophaga hutchinsonii atcc 33406. 59 d2b5xa1 not modelled 99.9 14 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 60 d1st9a_ not modelled 99.9 17 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 61 c3me8B_ not modelled 99.9 14 PDB header:electron transport Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of putative electron transfer protein aq_2194 from2 aquifex aeolicus vf5 62 c1nm3B_ not modelled 99.9 21 PDB header:electron transport Chain: B: PDB Molecule:protein hi0572; PDBTitle: crystal structure of heamophilus influenza hybrid-prx5 63 d1xzoa1 not modelled 99.9 16 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 64 c2b7kD_ not modelled 99.9 15 PDB header:metal binding protein Chain: D: PDB Molecule:sco1 protein; PDBTitle: crystal structure of yeast sco1 65 c3lorB_ not modelled 99.9 13 PDB header:isomerase Chain: B: PDB Molecule:thiol-disulfide isomerase and thioredoxins; PDBTitle: the crystal structure of a thiol-disulfide isomerase from2 corynebacterium glutamicum to 2.2a 66 c3or5A_ not modelled 99.9 17 PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein, thioredoxin family PDBTitle: crystal structure of thiol:disulfide interchange protein, thioredoxin2 family protein from chlorobium tepidum tls 67 c3lwaA_ not modelled 99.9 17 PDB header:isomerase Chain: A: PDB Molecule:secreted thiol-disulfide isomerase; PDBTitle: the crystal structure of a secreted thiol-disulfide2 isomerase from corynebacterium glutamicum to 1.75a 68 c3eytA_ not modelled 99.9 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein spoa0173; PDBTitle: crystal structure of thioredoxin-like superfamily protein spoa0173 69 c3erwG_ not modelled 99.9 15 PDB header:oxidoreductase Chain: G: PDB Molecule:sporulation thiol-disulfide oxidoreductase a; PDBTitle: crystal structure of stoa from bacillus subtilis 70 c2rliA_ not modelled 99.8 15 PDB header:metal transport Chain: A: PDB Molecule:sco2 protein homolog, mitochondrial; PDBTitle: solution structure of cu(i) human sco2 71 c2k6vA_ not modelled 99.8 18 PDB header:electron transport Chain: A: PDB Molecule:putative cytochrome c oxidase assembly protein; PDBTitle: solution structures of apo sco1 protein from thermus2 thermophilus 72 c3eurA_ not modelled 99.8 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the c-terminal domain of uncharacterized protein2 from bacteroides fragilis nctc 9343 73 c3fkfC_ not modelled 99.8 12 PDB header:oxidoreductase Chain: C: PDB Molecule:thiol-disulfide oxidoreductase; PDBTitle: thiol-disulfide oxidoreductase from bacteroides fragilis nctc 9343 74 c3ia1A_ not modelled 99.8 17 PDB header:oxidoreductase Chain: A: PDB Molecule:thio-disulfide isomerase/thioredoxin; PDBTitle: crystal structure of thio-disulfide isomerase from thermus2 thermophilus 75 c3ewlA_ not modelled 99.8 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized conserved protein bf1870; PDBTitle: crystal structure of conserved protein bf1870 of unknown function from2 bacteroides fragilis 76 d1zzoa1 not modelled 99.8 17 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 77 d2fy6a1 not modelled 99.8 12 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 78 c3fw2A_ not modelled 99.8 13 PDB header:oxidoreductase Chain: A: PDB Molecule:thiol-disulfide oxidoreductase; PDBTitle: c-terminal domain of putative thiol-disulfide oxidoreductase from2 bacteroides thetaiotaomicron. 79 d1wp0a1 not modelled 99.8 18 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 80 c3cynC_ not modelled 99.8 12 PDB header:oxidoreductase Chain: C: PDB Molecule:probable glutathione peroxidase 8; PDBTitle: the structure of human gpx8 81 d1knga_ not modelled 99.8 16 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 82 c2p5qA_ not modelled 99.8 11 PDB header:oxidoreductase Chain: A: PDB Molecule:glutathione peroxidase 5; PDBTitle: crystal structure of the poplar glutathione peroxidase 5 in2 the reduced form 83 c2v1mA_ not modelled 99.8 10 PDB header:oxidoreductase Chain: A: PDB Molecule:glutathione peroxidase; PDBTitle: crystal structure of schistosoma mansoni glutathione2 peroxidase 84 c3dwvB_ not modelled 99.8 12 PDB header:oxidoreductase Chain: B: PDB Molecule:glutathione peroxidase-like protein; PDBTitle: glutathione peroxidase-type tryparedoxin peroxidase,2 oxidized form 85 c2he3A_ not modelled 99.8 10 PDB header:oxidoreductase Chain: A: PDB Molecule:glutathione peroxidase 2; PDBTitle: crystal structure of the selenocysteine to cysteine mutant of human2 glutathionine peroxidase 2 (gpx2) 86 d2f8aa1 not modelled 99.8 10 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 87 c2p31B_ not modelled 99.8 13 PDB header:oxidoreductase Chain: B: PDB Molecule:glutathione peroxidase 7; PDBTitle: crystal structure of human glutathione peroxidase 7 88 d1o8xa_ not modelled 99.7 13 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 89 c3cmiA_ not modelled 99.7 8 PDB header:oxidoreductase Chain: A: PDB Molecule:peroxiredoxin hyr1; PDBTitle: crystal structure of glutathione-dependent phospholipid peroxidase2 hyr1 from the yeast saccharomyces cerevisiae 90 d1gp1a_ not modelled 99.7 11 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 91 c2obiA_ not modelled 99.7 9 PDB header:oxidoreductase Chain: A: PDB Molecule:phospholipid hydroperoxide glutathione PDBTitle: crystal structure of the selenocysteine to cysteine mutant2 of human phospholipid hydroperoxide glutathione peroxidase3 (gpx4) 92 d1o73a_ not modelled 99.7 13 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 93 c3razA_ not modelled 99.7 13 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin-related protein; PDBTitle: the crystal structure of thioredoxin-related protein from neisseria2 meningitidis serogroup b 94 d1z5ye1 not modelled 99.7 14 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 95 d1i5ga_ not modelled 99.6 15 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like 96 c2r37A_ not modelled 99.6 14 PDB header:oxidoreductase Chain: A: PDB Molecule:glutathione peroxidase 3; PDBTitle: crystal structure of human glutathione peroxidase 3 (selenocysteine to2 glycine mutant) 97 c3f9uA_ not modelled 99.3 8 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported cytochrome c biogenesis-related protein; PDBTitle: crystal structure of c-terminal domain of putative exported cytochrome2 c biogenesis-related protein from bacteroides fragilis 98 c2l57A_ not modelled 99.0 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of an uncharacterized thioredoin-like protein from2 clostridium perfringens 99 c2ju5A_ not modelled 98.9 18 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin disulfide isomerase; PDBTitle: dsbh oxidoreductase 100 c2kucA_ not modelled 98.8 15 PDB header:isomerase Chain: A: PDB Molecule:putative disulphide-isomerase; PDBTitle: solution structure of a putative disulphide-isomerase from bacteroides2 thetaiotaomicron 101 d1z6na1 not modelled 98.7 12 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 102 d2fwha1 not modelled 98.6 15 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 103 c2pptA_ not modelled 98.6 14 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin-2; PDBTitle: crystal structure of thioredoxin-2 104 d1j08a2 not modelled 98.4 15 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like 105 c3p2aB_ not modelled 98.4 12 PDB header:oxidoreductase Chain: B: PDB Molecule:putative thioredoxin-like protein; PDBTitle: crystal structure of thioredoxin 2 from yersinia pestis 106 c3ul3A_ not modelled 98.4 17 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: structural insights into thioredoxin-2: a component of malaria2 parasite protein secretion machinery 107 c3fk8A_ not modelled 98.3 11 PDB header:isomerase Chain: A: PDB Molecule:disulphide isomerase; PDBTitle: the crystal structure of disulphide isomerase from xylella fastidiosa2 temecula1 108 d1sena_ not modelled 98.3 16 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 109 c1senA_ not modelled 98.3 16 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:thioredoxin-like protein p19; PDBTitle: endoplasmic reticulum protein rp19 o95881 110 c3p2aA_ not modelled 98.3 14 PDB header:oxidoreductase Chain: A: PDB Molecule:putative thioredoxin-like protein; PDBTitle: crystal structure of thioredoxin 2 from yersinia pestis 111 c1v98A_ not modelled 98.3 15 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: crystal structure analysis of thioredoxin from thermus thermophilus 112 c3emxB_ not modelled 98.3 19 PDB header:oxidoreductase Chain: B: PDB Molecule:thioredoxin; PDBTitle: crystal structure of thioredoxin from aeropyrum pernix 113 d1m7ta_ not modelled 98.3 16 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 114 d1f9ma_ not modelled 98.3 16 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 115 c2xbqB_ not modelled 98.2 19 PDB header:oxidoreductase Chain: B: PDB Molecule:thioredoxin; PDBTitle: crystal structure of reduced schistosoma mansoni2 thioredoxin pre-protein at 1.7 angstrom 116 c2vlvA_ not modelled 98.2 17 PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin h isoform 2.; PDBTitle: crystal structure of barley thioredoxin h isoform 2 in2 partially radiation-reduced state 117 d1gh2a_ not modelled 98.2 14 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase 118 c2i1uA_ not modelled 98.2 17 PDB header:electron transport Chain: A: PDB Molecule:thioredoxin; PDBTitle: mycobacterium tuberculosis thioredoxin c 119 c2diyA_ not modelled 98.2 16 PDB header:protein binding Chain: A: PDB Molecule:thioredoxin-like protein 2; PDBTitle: the solution structure of the thioredoxin domain of human2 thioredoxin-like protein 2 120 d1xwaa_ not modelled 98.2 16 Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0