|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
|
|
. | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
Query Sequence |   |
M | S | L | I | N | T | K | I | K | P | F | K | N | Q | A | F | K | N | G | E | F | I | E | I | T | E | K | D | T | E | G | R | W | S | V | F | F | F | Y | P | A | D | F | T | F | V | C | P | T | E | L | G | D | V | A | D | H | Y | E | E | L | Q | K | L | G | V | D | V | Y | A | V | S | T | D | T | . |
. |
. |
H | F |
Query Conservation |   |
|   |
|
|
|   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   | . | . | . |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
Template Conservation |   |
  |
|   |
|
|   |   |
|
|
|
|   |
|   |
|   | . | . | . |   |
|   |   |   |   |
|   |
|   |   |
|
|   |
|
|
|   |
|   | . |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
E | L | P | L | E | S | P | L | I | D | A | E | L | P | D | P | . |
. |
. |
R | G | G | R | Y | R | L | S | Q | F | H | E | P | L | L | A | V | V | F | X | . |
C | N | H | C | P | Y | V | K | G | S | I | G | E | L | V | A | L | A | E | R | Y | R | G | K | V | A | F | V | G | I | N | A | N | D | Y | E | K | Y | P | E |
Template Known Secondary structure |   |
|
|
| T | T |
| B |
|
|
|
|  |  |  |
| T | . | . | . | T | S |
|  |  |  | G | G | G |
|
| S | S |  |  |  |  |  |  |  | . |
| S | S |
|  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |
|
|
| T | T | T |
| G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
| . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
|
|
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
140 | . | . | . | . | . | . | . | . | . | 150 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | H | K | A | W | H | S | S | S | E | T | I | A | K | I | K | Y | A | M | I | G | D | P | T | G | A | L | T | R | N | F | D | N | M | R | E | D | E | G | L | A | D | R | A | T | F | V | V | D | P | Q | G | I | I | Q | A | I | E | V | T | A | E | . |
. |
. |
. |
. |
. |
. |
G | I | G | R | D | A | S | D | L | L | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |
|
|   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   | . | . | . | . | . | . |   |
|   |   |   |
|
|
|   |   |
|   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
Template Sequence |   |
D | A | P | E | K | X | A | A | F | A | E | E | H | G | I | F | F | P | Y | L | L | D | E | T | Q | E | V | A | K | A | Y | R | A | L | R | . |
. |
. |
. |
. |
. |
T | P | E | V | F | L | F | D | E | R | R | L | L | R | Y | H | G | R | V | N | D | N | P | K | D | P | S | K | V | Q | S | H | D | L | E | A | A | I | E |
Template Known Secondary structure |   |
G | S |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S |
|  |  |  |
| S | S | S |  |  |  |  |  | T | T |
|
|  | . | . | . | . | . | . |  | S |  |  |  |  |  |
| T | T |
| B |  |  |  |  |  |
| S | S | S |
| T | T |
| G | G | G |
|
|
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
  |
  |   |
151 | . | . | . | . | . | |
|
. | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | I | K | A | A | Q | . |
. |
Y | V | A | S | H | P | G | E | V | C | P | A | K | W | K | E | G | E | A |
Query Conservation |   |
  |
|   |
|
|
| . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |
Template Sequence |   |
A | L | L | R | G | E | E | P | P | L | K | E | A | P | A | I | G | C | T | I | K | W | R | P | G | N | E |
Template Known Secondary structure |   |
 |  |  | T | T |
|
|
|
| S | S |
|
|
|
|
| S |  |  |
|
|
|
| T | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
  |