 |
Job Description | P0AE08 | Confidence | 99.94% | Date | Thu Jan 5 11:22:12 GMT 2012 |
Rank | 41 | Aligned Residues | 140 |
% Identity | 19% | Template | c2hyxA_ |
PDB info |
PDB header:unknown function | Chain: A: PDB Molecule:protein dipz; |
PDBTitle: structure of the c-terminal domain of dipz from mycobacterium2 tuberculosis
|
Resolution | 1.90 Å |
|
 |
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | |
|
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
. | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |
| . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
Query Sequence |   |
N | T | K | I | K | P | F | K | N | Q | A | . |
. |
F | K | N | G | E | F | I | E | I | T | E | K | D | T | E | G | R | W | S | V | F | F | F | Y | P | A | D | F | T | F | V | C | P | T | E | L | G | D | V | A | D | H | Y | E | E | L | Q | K | L | G | V | D | V | Y | A | V | S | T | D | . |
. |
T | H | F | T | H | K |
Query Conservation |   |
|   |   |
|
|
|
|   |
|   |   | . | . |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   | . | . |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |   |   |   |   |   |   |
|
|
|
|   |   |
|   |   |   |   |
|   |
|
|   |
|
|
|
|
|
|   |
|
| . |
|   |
|
|   |   |
|   |   |
|
|
|   |
|   |   |
|   |   |   |
|   |
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
C | G | T | A | P | D | L | K | G | I | T | G | W | L | N | T | P | G | N | K | P | I | D | L | K | S | L | R | G | K | V | V | L | I | D | F | W | . |
A | Y | S | C | I | N | C | Q | R | A | I | P | H | V | V | G | W | Y | Q | A | Y | K | D | S | G | L | A | V | I | G | V | H | T | P | E | Y | A | F | E | K | V | P |
Template Known Secondary structure |   |
|
| B |
|
|
|
|
| S |
|
|  |  |  | S | S | G | G | G |
|
|
|
| G | G | G | G | T | T | S |  |  |  |  |  |  |  | . |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | T |  |  |  |  |  |  |  |
|
| S | S | G | G | G | G |
|  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
397 | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | |
. | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | W | H | S | S | S | E | T | I | A | K | I | K | Y | A | M | I | G | D | P | T | G | A | L | T | R | N | F | D | N | M | R | E | D | E | G | L | A | D | R | A | T | F | V | V | D | P | Q | G | I | I | Q | A | I | E | V | T | A | E | G | I | G | R | D | A | S | D | L | L | R | K | I | K | A | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |   | . | . | . | . | . | . |   |
|
|   |   |
|
|
|   |   |
|   |
|
|   |   |   |   |
|
|   | . | . | . | . |
|   |   |   |
|
|   |   |
|   |   |
|
Template Sequence |   |
G | N | V | A | K | G | A | A | N | L | G | I | S | Y | P | I | A | L | D | N | N | Y | A | T | W | T | N | Y | R | N | R | Y | . |
. |
. |
. |
. |
. |
W | P | A | E | Y | L | I | D | A | T | G | T | V | R | H | I | K | F | G | E | G | . |
. |
. |
. |
D | Y | N | V | T | E | T | L | V | R | Q | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T |
|
| S |
|  |  |  |
| T | T | S |  |  |  |  |  | T | T |
|
| S | . | . | . | . | . | . | S | S |  |  |  |  |  |
| T | T | S | B |  |  |  |  |  |  | S | S |
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
476 | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | |
|
|
|
. | 530 | . | . | . | . | . | . | . | . | . | 540 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|