|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
|
|
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
60 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
Query Sequence |   |
S | L | I | N | T | K | I | K | P | F | K | N | Q | A | F | K | N | G | E | F | I | E | I | T | E | K | D | T | E | . |
. |
. |
G | R | W | S | V | F | F | F | Y | P | A | D | F | T | F | V | C | P | T | E | L | G | D | V | A | D | H | Y | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | L | Q | K | L |
Query Conservation |   |
  |
|
|
|   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   | . | . | . |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |
|   |   |   |   |   | . | . |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
C | V | V | G | T | R | F | K | S | Q | P | V | V | . |
. |
R | H | S | E | G | L | W | M | H | F | G | D | R | L | V | T | D | G | R | F | R | I | I | V | F | A | G | K | A | T | D | A | T | Q | M | S | R | I | K | K | F | A | A | Y | L | D | S | E | N | S | V | I | S | R | Y | T | P | K | G | A | D | R | N | S | R |
Template Known Secondary structure |   |
S |
| T | T | S | B |
|
|
|
|  |  |  | . | . |  | T | T | T | T |  |  |  |  | G | G | G | G |
|
|
| S | S |
|  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | S |  |  |  |  |  | S | B | T | T | S |
| T | T | S | S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  | . | . |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
478 | . | 480 | . | . | . | . | . | . | . | . | . | 490 | |
|
. | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . |
  |
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | D | V | Y | A | V | S | T | D | T | H | F | T | H | K | A | W | H | S | S | S | E | T | I | A | K | I | K | Y | A | M | I | . |
. |
. |
. |
. |
. |
. |
G | D | P | T | G | A | L | T | R | N | F | D | N | M | R | E | D | E | G | L | A | D | R | A | T | F | V | V | D | P | Q | G | I | I | Q | A | I | E | V | T |
Query Conservation |   |
  |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . |   |
|   |   |   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |
|   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . | . | . |   |   |
|
|
|
|
|
|   |   |
|
|   |   |   | . | . |
Template Sequence |   |
I | D | V | I | T | I | H | S | C | H | R | D | D | I | E | M | H | D | F | P | A | P | A | L | H | P | K | W | Q | Y | D | F | I | Y | A | D | C | D | S | W | H | H | P | H | P | K | S | Y | Q | A | W | G | V | D | E | T | K | G | . |
. |
. |
. |
. |
A | V | V | V | V | R | P | D | G | Y | T | S | L | V | T | . |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | S | S |
| T | T | S |
|
| G | G | G | S |
| T | T | T | T | S |
| T | T |
|
| S | S |  |  |  |
| S |
|
| S | S | S |
|
|
|
|  |  |  |  |  | T | B |
| T | T | T |
| . | . | . | . | . |  |  |  |  |  |
| T | T | S | B |  |  |  |  |  | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
556 | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | |
|
  |
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
. | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | G | I | G | R | D | A | S | D | L | L | R | K | I | K | A | A | Q | Y | . |
V | A | S | H | P | G | E | V | C | P | A | K | W | K | E | G |
Query Conservation |   |
  |   |   |   |
|
|   |   |   |
|   |
|
|   |
|   |
|
|
|   | . |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
. |
. |
. |
D | L | E | G | T | A | E | I | D | R | Y | F | S | G | I | L | V | E | P | K | E | K | S | G | A | Q | T | E | A | D | W | T | K | S |
Template Known Secondary structure |   |
. | . | . |
| T | T | T |  |  |  |  |  |  |  |  |  | T | T | B |
|
|
| S | S | B |
|
| S |
|
|
|
|
| T | T |
|
|
Template Predicted Secondary structure |   |
. | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
629 | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . |
  |