 |
Job Description | P16431 | Confidence | 9.26% | Date | Thu Jan 5 11:35:07 GMT 2012 |
Rank | 78 | Aligned Residues | 36 |
% Identity | 17% | Template | d1jt8a_ |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | UNK |
|
  |   |
463 | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | Y | I | P | H | R | F | A | L | G | F | A | E | A | P | R | G | D | D | I | H | W | S | M | T | G | D | N | Q | K | L | Y | R | W | R | C | R |
Query Conservation |   |
  |   |   |
|   |
|
|
|   |
|   |
|
|
|
|
|
|   |
|   |
|   |
|   |   |
|   |   |
|
|
|   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |
|   |   |
|   |
|   |   |   |
|
|   |   |   |   |   |
|   |   | . |   |
|
|   |   |   |
|   |   |
|
|
Template Sequence |   |
P | R | K | E | E | N | E | I | L | G | I | I | E | Q | M | L | G | A | S | R | V | R | V | R | C | . |
L | D | G | K | T | R | L | G | R | I | P |
Template Known Secondary structure |   |
S |
|
| S | S |
|
|  |  |  |  |  |  |
| S | S |
| S | S |  |  |  |  |  |  | . |  | T | T |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
40 | . | . | . | . | . | . | . | . | . | 50 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|