Job Description P61320 Confidence 16.75% Date Thu Jan 5 12:07:21 GMT 2012 Rank 8 Aligned Residues 81 % Identity 15% Template d1vpka2 SCOP info DNA clamp DNA clamp DNA polymerase III, beta subunit Resolution 2.00

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		T	E	L	E	L	N	A	Q	P	G	N	V	Q	L	V	D	N	K	G	Q	R	Y	T	A	D	D	A	E	E	M	I	G	K	L	T	G	M	P	I	P	L	N	S	L	R	Q	W	I	L	G	L	P	G	D	A	.	T	D	Y	K	L	D	D	Q	Y	R	L	S	E	I	T	Y	S	Q	N	G	K	N	W	K
Query Conservation																																																									.
Alig confidence																																																									.																	.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		N	G	V	F	W	E	L	H	K	N	L	L	R	L	V	A	S	D	G	F	R	L	A	L	A	E	E	Q	I	E	N	E	E	E	A	S	F	L	L	S	L	K	S	M	K	E	V	Q	N	V	L	D	N	T	T	E	P	T	I	T	V	R	Y	D	G	R	R	V	S	L	S	T	.	.	.	.	N	D	V	E
Template Known Secondary structure		S								T	T									S	S													S																				T				S								S	S							.	.	.	.	S	S
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230
		171	.								.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.
Query Sequence		V	V	.	.	.	.	.	.	.	Y	G	G	Y
Query Conservation				.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	M	R	V	V	D	A	E	F	P	D	Y
Template Known Secondary structure								S	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions