Job Description P61320 Confidence 2.88% Date Thu Jan 5 12:07:21 GMT 2012 Rank 46 Aligned Residues 88 % Identity 11% Template d1vpka1 SCOP info DNA clamp DNA clamp DNA polymerase III, beta subunit Resolution 2.00

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		T	E	L	E	L	N	A	Q	P	G	N	V	Q	L	V	D	N	K	G	Q	R	Y	T	A	D	D	A	E	.	E	M	I	G	K	L	T	G	M	P	I	P	L	N	S	L	R	Q	W	I	L	G	L	P	G	D	A	T	D	Y	K	L	D	D	Q	Y	R	L	S	E	I	T	Y	S	Q	N	G	K	N	W	K
Query Conservation																														.
Alig confidence																														.																																				.	.	.	.									.	.
Template Conservation																																																																		.	.	.	.									.	.
Template Sequence		A	G	F	L	F	E	V	K	D	G	N	F	Y	I	C	A	T	D	L	E	T	G	V	K	A	T	V	N	A	A	E	I	S	G	E	A	R	F	V	V	P	G	D	V	I	Q	K	M	V	K	V	L	P	D	E	I	T	E	L	S	L	E	G	D	.	.	.	.	A	L	V	I	S	S	G	S	.	.	T	V
Template Known Secondary structure		G								T	T									S	S	S									S				S																T	T			S	S								T	T	.	.	.	.							T	T	.	.
Template Predicted Secondary structure																																																																		.	.	.	.									.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.					.	.	.	.	.	100	.	.			.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	Y	G	G	Y	D	T	K	T	Q	P	A	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	I	T	T	M	P	A	D	E	F	P	E	I	T
Template Known Secondary structure							B			T	T	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions