Job Description P61320 Confidence 76.65% Date Thu Jan 5 12:07:21 GMT 2012 Rank 2 Aligned Residues 169 % Identity 12% Template c3buuB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized lola superfamily protein ne2245; PDBTitle: crystal structure of lola superfamily protein ne2245 from2 nitrosomonas europaea Resolution 1.20 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		K	S	P	D	S	P	Q	W	R	Q	H	Q	Q	D	V	R	N	L	N	Q	Y	Q	T	R	G	A	F	A	Y	I	S	D	Q	Q	K	V	.	Y	A	R	F	F	W	Q	Q	T	G	Q	D	R	Y	R	L	L	L	T	N	P	L	G	S	T	E	L	E	L	N	A	Q	P	G	N	V	Q	L	V	D	N	K	G
Query Conservation																																						.
Alig confidence																																						.
Template Conservation
Template Sequence		A	V	T	A	Q	S	I	L	E	K	A	D	E	I	R	F	P	Q	D	S	F	Q	V	N	V	A	I	R	T	A	A	P	D	H	A	E	D	L	Y	R	Y	Q	V	L	S	K	G	N	E	N	S	I	V	X	I	T	E	P	A	S	E	R	G	Q	A	I	L	X	K	G	R	D	L	W	V	F	X	P	S	V
Template Known Secondary structure																	S		S	S													T	T	S													T	T	T									S	T	T	T	T	T							T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	Y	T	A	D	D	A	E	E	M	I	G	K	L	T	G	M	P	I	P	L	N	S	L	R	Q	W	I	L	G	L	P	G	D	A	T	D	Y	K	L	D	D	Q	Y	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.
Template Sequence		S	Q	P	I	R	L	S	L	S	Q	R	L	T	G	Q	V	.	.	.	.	.	.	.	A	N	G	D	I	A	R	A	N	F	T	G	D	Y	H	P	Q	L	L	R	N	E	S	I	D	D	E	D	Y	Y	V	L	E	L	T	G	I	D	R	S	V	T	Y	Q	K	V	L	L	W	V	N	Q	S	N	F	R	P
Template Known Secondary structure		S	S						S	S	S				T	T		.	.	.	.	.	.	.										S	B	T	T												T	T											S	S	T	T	S	S		S								T	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.								130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
			158	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure		.													.																									.	.	.
Query SS confidence		.													.																									.	.	.
Query Sequence		.	S	E	I	T	Y	S	Q	N	G	K	N	W	.	K	V	V	Y	G	G	Y	D	T	K	T	Q	P	A	M	P	A	N	M	E	L	T	D	G	.	.	.	G	Q	R	I	K	L	K	M	D	N	W	I	V	K
Query Conservation		.													.																									.	.	.
Alig confidence		.													.																									.	.	.
Template Conservation
Template Sequence		Y	K	A	E	F	Y	S	V	S	G	R	L	L	K	T	S	R	Y	E	N	F	D	N	I	L	G	E	X	R	P	T	R	I	I	X	E	D	A	L	K	S	G	E	V	S	V	L	D	Y	S	D	X	K	L	R
Template Known Secondary structure									T	T	S															T	T												S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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