Job Description P30139 Confidence 99.56% Date Thu Jan 5 11:46:05 GMT 2012 Rank 101 Aligned Residues 206 % Identity 21% Template d2tpsa_ SCOP info TIM beta/alpha-barrel Thiamin phosphate synthase Thiamin phosphate synthase Resolution 1.25

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		1	.	.	.	.	.	.	.	.	10	.			.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40							.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.								.	.	.																							.	.	.	.	.	.
Query SS confidence													.	.								.	.	.																							.	.	.	.	.	.
Query Sequence		M	L	R	I	A	D	K	T	F	D	S	.	.	H	L	F	T	G	T	G	.	.	.	K	F	A	S	S	Q	L	M	V	E	A	I	R	A	S	G	S	Q	L	V	T	L	.	.	.	.	.	.	A	M	K	R	V	D	L	R	Q	H	N	D	A	I	L	E	P	L	I	A	A	G	V	T	L	L	P	N	T
Query Conservation													.	.								.	.	.																							.	.	.	.	.	.
Alig confidence													.	.								.	.	.																							.	.	.	.	.	.
Template Conservation
Template Sequence		M	T	R	I	S	R	E	M	M	K	E	L	L	S	V	Y	F	I	M	G	S	N	N	T	K	A	D	P	V	T	V	V	Q	K	A	L	K	G	G	A	T	L	Y	Q	F	R	E	K	G	G	D	A	L	T	G	E	A	R	I	K	F	A	E	K	A	Q	A	A	C	R	E	A	G	V	P	F	I	V	N	D
Template Known Secondary structure		S	S											T	T							G	G	G		S	S													T		S								S	T	T																						T							S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	P	V	L	C	K	R	L	E	E	V	G	C	A	A	V	M
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	.	.	.	.	.	.	.	.	.	.	.	.	E	L	A	L	N	L	K	A	D	G	I	H	I	G	Q	E	D	A	N	A	.	.	.	.	.	.	.	.	.	.	.	.	K	E	V	R	A	A	I	G	D	M	I	L	G	V	S	A	H	T	M	S	E	V	K	Q	A	E	E	D	G	A	D	Y	V	G
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.							T		S						T	T	S	S			.	.	.	.	.	.	.	.	.	.	.	.								T	T	S								S											T		S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.													.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.													.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure											.	.	.	.																.
Query SS confidence											.	.	.	.																.
Query Sequence		P	L	G	A	P	I	G	S	N	.	.	.	.	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	.	A	T	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	E	M	G	A	D	A	V	L	V	N	T	A	I	A	V	A	D	D	P	V	N	M	A	K	A	F	R	L	A	V
Query Conservation											.	.	.	.																.
Alig confidence											.	.	.	.																.												.
Template Conservation																																										.
Template Sequence		L	G	P	I	Y	P	T	E	T	K	K	D	T	R	A	V	Q	G	V	S	L	I	E	A	V	R	R	Q	G	I	S	I	P	I	V	G	I	G	G	I	.	T	I	D	N	A	A	P	V	I	Q	A	G	A	D	G	V	S	M	I	S	A	I	S	Q	A	E	D	P	E	S	A	A	R	K	F	R	E	E	I
Template Known Secondary structure					S	S				S	S	S	S						T	T									T	T									S	S		.		T	T	T	S						T	T		S					S					T	S	S
Template Predicted Secondary structure																																										.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	G	L	L	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	T	Y	K	T	G	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions