Job Description P30139 Confidence 97.37% Date Thu Jan 5 11:46:05 GMT 2012 Rank 229 Aligned Residues 190 % Identity 13% Template d2q8za1 SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Decarboxylase Resolution 1.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.
Query Sequence		V	E	A	I	R	A	S	G	S	Q	L	V	T	L	A	M	K	R	V	D	L	R	Q	H	N	.	.	.	.	.	.	.	D	A	I	L	E	P	L	I	A	A	G	V	T	L	L	P	N	T	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H
Query Conservation																											.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	Y	I	I	N	E	T	N	K	Y	A	L	T	F	K	M	N	F	A	F	Y	I	P	Y	G	S	V	G	I	D	V	L	K	N	V	F	D	Y	L	Y	E	L	N	I	P	T	I	L	D	M	K	I	N	D	I	G	N	T	V	K	N	Y	R	K	F	I	F	E	Y	L	K	S	D	S	C	T	V	N	I	Y
Template Known Secondary structure									G	G	G		S						G	G	G	T	S	T	T	T																		T																									T	T	S			S							T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																		.	.	.	.	.	.	140	.	.	.											.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	L	C	K	R	L	E	E	V	.	.	.	.	.	.	.	.	.	.	G	C	A	A	V	M	P	L	G
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.
Template Sequence		M	G	T	N	M	L	K	D	.	.	.	.	I	C	Y	D	E	E	K	N	K	Y	Y	S	A	F	V	L	V	K	T	T	N	P	D	S	A	I	F	Q	K	N	L	S	L	D	N	K	Q	A	Y	V	I	M	A	Q	E	A	L	N	M	S	S	Y	L	N	L	E	Q	N	N	E	F	I	G	F	V	V	G	A
Template Known Secondary structure		T		S	G	G	G	G	G	.	.	.	.	T	S			T	T	T	T													S	T	T	T					T	T				T	T																		T	T	T	G	G	G	T									T
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.												.	.	.
Query SS confidence																																		.	.	.	.												.	.	.
Query Sequence		A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	T	V	P	V	V	V	D	A	G	I	.	.	.	.	G	V	P	S	H	A	A	Q	A	L	E	.	.	.	M	G	A	D	A	V	L	V	N	T	A	I	A	V	A	D	D	P	V	N	M	A	K	A	F	R	L	A	V	E
Query Conservation																																		.	.	.	.												.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.																						.	.	.	.												.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.
Template Sequence		N	S	.	.	.	.	.	.	.	.	.	Y	D	E	M	N	Y	I	R	T	Y	F	P	N	C	Y	I	L	S	P	G	I	G	A	Q	N	G	D	L	H	K	T	L	T	N	G	Y	H	K	S	Y	E	K	I	L	I	N	I	G	R	A	I	T	K	N	P	Y	P	Q	K	A	A	Q	M	Y	Y	D	Q	I	N
Template Known Secondary structure		T		.	.	.	.	.	.	.	.	.											S	T	T								S	S	T	T														S	S	G	G	G											T	S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.										.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		226	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions