Return to main results Retrieve Phyre Job Id

Job DescriptionP30139
Confidence99.17%DateThu Jan 5 11:46:05 GMT 2012
Rank138Aligned Residues147
% Identity20%Templated2czda1
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Decarboxylase
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.........100.........110.........120.........130.... .....140.......
Predicted Secondary structure 
























....



Query SS confidence 






























































. . . .












Query Sequence  AKTAEEAIFAAHLAREALGTNWLKLEIHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGADP. . . . VLCKRLEEVGCAA
Query Conservation            
       
 
 
 
 
      
  
  
 
 
       
  
        ....  

    



 
Alig confidence 















..








....































....












Template Conservation                  .. 

 

 
 ....      
   
  
       
  
 
  

              


 
Template Sequence  VYEGERAIKIAKSVKD. . YISMIKVNW. . . . PLILGSGVDIIRRLKEETGVEIIADLKLADIPNTNRLIARKVFGAGADY
Template Known Secondary structure 

SGG..G
S....
TT


S
TT
S
Template Predicted Secondary structure 




..



....












Template SS confidence 















































































   8.10.........20... ......30.. .......40.........50.........60.........70.........80.
 
   148.150.... .....160.........170..... ....180.
Predicted Secondary structure 


.............................................










.

Query SS confidence 






. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .




















.





Query Sequence  VMPLGAP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IGSNQGLETRAMLEIIIQQAT. VPVVVD
Query Conservation 
 
 
  ............................................. 
   
      
  
     . 


  
Alig confidence 






.............................................




















.





Template Conservation 



       
               
                      
  
              
        
  
Template Sequence  VIVHTFVGRDSVMAVKELGEIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGTRPERIGYIRDRLKEGIKILA
Template Known Secondary structure  STT
TTS



SGGGGTTTGGG

S


SSTS
TT
Template Predicted Secondary structure 




























Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   182... ....190.........200.........210.........220....
Predicted Secondary structure 



.







Query SS confidence 



.






































Query Sequence  AGIG. VPSHAAQALEMGADAVLVNTAIAVADDPVNMAKAFRLAV
Query Conservation 


 .   
       


 
 




    

         

Alig confidence 



.






































Template Conservation   
 
            


 



 

  
 

  

  
   
Template Sequence  PGIGAQGGKAKDAVKAGADYIIVGRAIYNAPNPREAAKAIYDEI
Template Known Secondary structure 



SSTTT
S
TSSS
Template Predicted Secondary structure 


















Template SS confidence 











































   162.......170.........180.........190.........200.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions