Job Description P30139 Confidence 95.60% Date Thu Jan 5 11:46:05 GMT 2012 Rank 298 Aligned Residues 169 % Identity 16% Template d1wdda1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.35

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110							.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.																																										.	.	.	.	.	.
Query SS confidence																									.	.	.																																										.	.	.	.	.	.
Query Sequence		L	R	Q	H	N	D	A	I	L	E	P	L	I	A	A	G	V	T	L	L	P	N	T	.	.	.	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	.	.	.	.	.	.	E	T	L	K	A	A	E
Query Conservation																									.	.	.																																										.	.	.	.	.	.
Alig confidence																									.	.	.																			.											.												.	.	.	.	.	.
Template Conservation																																														.											.
Template Sequence		P	P	H	G	I	Q	V	E	R	D	K	L	N	K	Y	G	R	P	L	L	G	C	T	I	K	P	K	L	G	L	S	A	K	N	Y	G	R	A	C	Y	E	C	L	R	.	G	G	L	D	F	T	D	D	E	N	.	V	N	S	Q	P	F	M	R	W	R	D	R	F	V	F	C	A	E	A	I	Y	K	S	Q
Template Known Secondary structure				S										T			S	S								S	S	S	S																	.	T	T		S	B				T	T	.		S	S	B	T	T	B
Template Predicted Secondary structure																																														.											.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180
Predicted Secondary structure																.			.	.	.	.																																							.	.	.										.	.	.	.	.	.	.	.	.
Query SS confidence																.			.	.	.	.																																							.	.	.										.	.	.	.	.	.	.	.	.
Query Sequence		T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	.	A	D	.	.	.	.	P	V	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	.	.	.	Q	Q	A	T	V	P	V	V	V	.	.	.	.	.	.	.	.	.
Query Conservation																.			.	.	.	.																																							.	.	.										.	.	.	.	.	.	.	.	.
Alig confidence																.			.	.	.	.																								.	.	.	.	.	.	.									.	.	.										.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.
Template Sequence		A	E	T	G	E	I	K	G	H	Y	L	N	A	T	A	G	T	C	E	E	M	I	K	R	A	V	F	A	R	E	L	G	V	P	I	V	M	H	D	Y	L	T	G	G	.	.	.	.	.	.	.	F	T	A	N	T	S	L	A	H	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D
Template Known Secondary structure					S	S			B								S	S															T		S											.	.	.	.	.	.	.															T								T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.								.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
					181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure		.	.	.																	.
Query SS confidence		.	.	.																	.
Query Sequence		.	.	.	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	E	M	.	G	A	D	A	V	L	V	N	T	A	I	A	V	A	D	D	P	V	N	M	A	K	A	F	R	L	A	V	E
Query Conservation		.	.	.																	.
Alig confidence		.	.	.					.												.
Template Conservation									.
Template Sequence		R	Q	K	N	H	G	M	.	H	F	R	V	L	A	K	A	L	R	M	S	G	G	D	H	I	H	A	G	T	V	V	G	K	L	E	G	E	R	E	M	T	L	G	F	V	D	L	L	R
Template Known Secondary structure		S		S	S	S	S		.															S							S	S	S	S	S
Template Predicted Secondary structure									.
Template SS confidence
		303	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions