Job Description P30139 Confidence 99.66% Date Thu Jan 5 11:46:05 GMT 2012 Rank 88 Aligned Residues 170 % Identity 19% Template d1w0ma_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.5

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		L	R	Q	H	N	D	A	I	L	E	P	L	I	A	A	G	V	T	L	L	P	N	.	.	.	.	.	T	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q
Query Conservation																								.	.	.	.	.
Alig confidence																								.	.	.	.	.																.	.	.	.																			.	.	.	.
Template Conservation																																												.	.	.	.																			.	.	.	.
Template Sequence		V	A	P	N	H	L	E	L	G	L	V	S	Q	S	V	D	I	P	V	Y	A	Q	G	A	D	V	E	A	G	G	A	H	T	A	H	V	S	L	E	N	I	K	.	.	.	.	E	A	G	G	S	G	V	I	L	N	H	S	E	A	P	L	K	L	.	.	.	.	N	D	L	A	R	L	V	A	K	A	K	S
Template Known Secondary structure						G	G	G						T	T		S	S		B			S			S	B	S	S		S	S		T	T			B						.	.	.	.			T									T	T	S					.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.																			.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.									.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.
Query Sequence		Q	G	F	V	V	L	P	Y	C	G	A	D	P	V	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	.	.	.	.	.	.	.	.	Q	Q	A	T	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A
Query Conservation																																																				.	.	.	.	.	.	.	.
Alig confidence												.																																								.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		L	G	L	D	V	V	V	C	A	P	.	D	P	R	T	S	L	A	A	A	A	L	G	P	H	A	V	A	V	E	P	P	E	L	I	G	T	G	R	A	V	S	R	Y	K	P	E	A	I	V	E	T	V	G	L	V	S	R	H	F	P	E	V	S	V	I	T	G	A	G	I	E	S	G	D	D	V	A	A	A
Template Known Secondary structure		T	T								S	.	S										T			S							G	G	G	T	T	T	S																							T	T	S						S	S			S
Template Predicted Secondary structure												.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	M	G	A	D	A	V	L	V	N	T	A	I	A	V	A	D	D	P	V	N	M	A	K	A	F	R	L	A	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	L	G	T	R	G	V	L	L	A	S	A	A	V	K	A	K	D	P	Y	A	K	I	V	E	L	A	K	P	L	S
Template Known Secondary structure				T	T		S										T		S	S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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