Return to main results Retrieve Phyre Job Id

Job DescriptionP30139
Confidence98.46%DateThu Jan 5 11:46:05 GMT 2012
Rank164Aligned Residues146
% Identity12%Templated1vqta1
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Decarboxylase
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70.........80.........90.........100.........110.........120.........130..
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  AILEPLIAAGVTLLPNTSGAKTAEEAIFAAHLAREALGTNWLKLEIHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGA
Query Conservation               
    
          
       
 
 
 
 
      
  
  
 
 
       
  
      
Alig confidence 


































.











........























Template Conservation    
  
      
  
 
  

  
          . 


 



  
........
   
          
  
   

Template Sequence  KIFDELAKRNLKIILDLKFCDIPSTVERSIKSWDH. PAIIGFTVHSCA. . . . . . . . GYESVERALSATDKHVFVVVKLTS
Template Known Secondary structure  TTT

S


.TTGGG........

SS


TT
Template Predicted Secondary structure 






.





........





Template SS confidence 















































































   37..40.........50.........60.........70. ........80... ......90.........100.......
 
   133 ......140.........150.........160.........170.........180.........190.........200.....
Predicted Secondary structure 
.......



























Query SS confidence 
. . . . . . .







































































Query Sequence  D. . . . . . . PVLCKRLEEVGCAAVMPLGAPIGSNQGLETRAMLEIIIQQATVPVVVDAGIGVPSHAAQALEMGADAVLVNT
Query Conservation   .......   

    



 
 
 
   
   
      
  
      


  


    
       


 
 


Alig confidence 
.......














.............

















.



.



















Template Conservation                    
   
.............                 
. 


.           


 




Template Sequence  MEGSLEDYMDRIEKLNKLGCDFV. . . . . . . . . . . . . LPGPWAKALREKIKGKIL. VPGI. RDVVTLEEMKGIANFAVLGR
Template Known Secondary structure  S


T
.............

TTT

S
.

B.


B
TTT
SS
Template Predicted Secondary structure 







.............







.



.









Template SS confidence 















































































   108.110.........120.........130 .........140........ .150.. .......160.........170..
 
   206...210.........220..
Predicted Secondary structure 



Query SS confidence 
















Query Sequence  AIAVADDPVNMAKAFRL
Query Conservation 

    

         
Alig confidence 
















Template Conservation 

  
 

  

  
 
Template Sequence  EIYLSENPREKIKRIKE
Template Known Secondary structure  TSS
T
Template Predicted Secondary structure 




Template SS confidence 
















   182.......190........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions