Job Description P30139 Confidence 99.90% Date Thu Jan 5 11:46:05 GMT 2012 Rank 27 Aligned Residues 223 % Identity 11% Template d1tv5a1 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.40

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	A	D	K	T	F	D	S	H	L	F	T	G	T	G	K	F	A	S	S	Q	L	M	V	E	A	I	R	A	S	G	S	Q	L	V	T	L	A	M	K	R	V	D	L	R	Q	H	N	D	A	I	L	E	P	L	I	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		N	I	K	H	L	D	F	I	N	P	F	G	V	A	A	G	.	F	D	K	N	G	V	C	I	D	S	I	L	K	L	G	F	S	F	I	E	I	G	T	I	T	P	R	G	Q	T	G	N	A	K	P	R	I	F	R	D	V	E	S	R	S	I	I	N	S	C	G	F	N	N	M	G	C	D	K	V	T	E	N
Template Known Secondary structure				T	T				S	S	S					T	T	.	T	T	T	T		S	S						T	T	T		S									S	S		B			S		S							T	T	T	T								S		B	S
Template Predicted Secondary structure																		.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
																	62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.							110	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.																				.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.																				.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	T	L	L	P	N	T	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	.	.	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	.	.	.	.	.	.	I	E	T	L	K	A	A	E	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.																				.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.																				.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	L	F	R	K	R	Q	E	E	D	K	L	L	S	K	H	I	V	G	V	S	I	G	K	N	K	D	T	V	N	I	V	D	D	L	K	Y	C	I	N	K	I	G	R	Y	A	D	Y	I	A	I	N	V	S	S	P	N	T	P	G	L	R	D	N	Q	E	A	G	K	L	K	N	I	I	L	S	V	K	E
Template Known Secondary structure													S	T	T	T	T											T	T		S														G	G	G		S									T	T	S	T	T	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		119	120	.														.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	F	V	V	L	P	Y	C	G	A	D	.	.	.	.	P	V	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	S	N	Q	G	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	A
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	D	N	L	E	F	L	W	F	N	T	T	K	K	K	P	L	V	F	V	K	L	A	P	D	L	N	Q	E	Q	K	K	E	I	A	D	V	L	L	E	T	N	I	D	G	M	I	I	S	N	T	T	T	Q	I	N	D	I	K	S	F	E	N	K	K	G	G	V	S	G	A	K	L	K	D	I	S	T	K
Template Known Secondary structure												S	S	S	S	S										S																	T	T		S								B	S						G	G	G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure												.	.																																				.			.
Query SS confidence												.	.																																				.			.
Query Sequence		M	L	E	I	I	I	Q	Q	A	T	.	.	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	E	M	G	A	D	A	V	L	V	N	T	A	I	A	V	A	.	D	D	.	P	V	N	M	A	K	A	F	R	L	A	V	E	A
Query Conservation												.	.																																				.			.
Alig confidence												.	.																																				.			.
Template Conservation
Template Sequence		F	I	C	E	M	Y	N	Y	T	N	K	Q	I	P	I	I	A	S	G	G	I	F	S	G	L	D	A	L	E	K	I	E	A	G	A	S	V	C	Q	L	Y	S	C	L	V	F	N	G	M	K	S	A	V	Q	I	K	R	E	L	N	H	L	L	Y	Q
Template Known Secondary structure										T	T	T		S						S	S			S										T	T							S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions