Job Description P30139 Confidence 94.19% Date Thu Jan 5 11:46:05 GMT 2012 Rank 341 Aligned Residues 134 % Identity 13% Template d1sw3a_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 2.03

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	T	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	P	V	L	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		V	P	K	G	A	F	T	G	E	I	S	P	A	M	I	K	.	.	.	.	D	I	G	A	A	W	V	I	L	G	H	S	E	R	R	H	V	F	G	E	S	D	E	L	I	G	Q	K	V	A	H	A	L	A	E	G	L	G	V	I	A	C	I	G	E	K	L	D	E	R	E	A	G	I	T	E	K	V	V	F
Template Known Secondary structure		S	S	S	S	S		T	T									.	.	.	.		T	T							S							T	S																	T	T																T	T
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
								137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.															.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	E	M
Query Conservation		.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																																																						.
Template Sequence		E	Q	T	K	A	I	A	D	N	V	K	D	W	S	K	V	V	L	A	Y	E	P	V	W	A	I	G	T	G	K	V	A	T	P	Q	Q	A	Q	E	V	H	E	K	L	R	G	W	L	K	S	H	V	S	D	A	V	A	Q	S	T	R	I	I	Y	G	G	S	V	.	T	G	G	N	C	K	E	L	A	S	Q
Template Known Secondary structure									T	T		S		G	G	G								G	G	G	S	S	S	S																							T														S	S		.		T	T	T						T	S
Template Predicted Secondary structure																																																																						.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.
			197	.	.	200	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	A	D	A	V	L	V	N	T	A
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		H	D	V	D	G	F	L	V	G	G	A
Template Known Secondary structure		T	T							S	G	G
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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