Job Description P30139 Confidence 99.46% Date Thu Jan 5 11:46:05 GMT 2012 Rank 114 Aligned Residues 216 % Identity 17% Template d1q45a_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.00

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.								.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.														.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.														.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	I	A	D	K	T	F	D	S	H	L	F	T	G	T	G	.	.	.	.	.	.	.	K	F	A	S	S	Q	L	M	V	E	A	I	R	.	A	S	G	S	Q	L	V	T	L	A	M	K	R	V	D	L	R	Q	H	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	I	L	E	P
Query Conservation																			.	.	.	.	.	.	.														.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.														.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	K	M	G	R	F	D	L	S	H	R	V	V	L	A	P	M	T	R	C	R	A	L	N	G	V	P	N	A	A	L	A	E	Y	Y	A	Q	R	T	T	P	G	G	F	L	I	S	E	G	T	M	V	S	P	G	S	A	G	F	P	H	V	P	G	I	Y	S	D	E	Q	V	E	A	W	K	Q	V	V	E	A
Template Known Secondary structure					T	T				S		S											S	G	G	G													T			T	T										S	S	T	T				S	T	T			B		S	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		58	.	60	.	.	.	.	.	.	.	.	.	70																																																					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	A	A	G	V	T	L	L	P	N	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	H	A	K	G	G	F	I	F	C	Q	L	W	H	V	G	R	A	S	H	A	V	Y	Q	P	N	G	G	S	P	I	S	S	T	N	K	P	I	S	E	N	R	W	R	V	L	L	P	D	G	S	H	V	K	Y	P	K	P	R	A	L	E	A	S	E	I	P	R	V	V	E	D	Y	C	L	S	A	L	N	A
Template Known Secondary structure					T	T											T	T	S			G	G	G	S	G	G	G						S	S	S					T	T	T						T	T	S													G	G	G
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																						.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.										.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.														.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.														.	.	.	.	.	.	.	.	.
Query Sequence		R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	P	I	E	T	L	K	A	A	E	T	L	V	.	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	.	.	.	.	.	.	.	.	.	P
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.														.	.	.	.	.	.	.	.	.
Alig confidence					.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.														.	.	.	.	.	.	.	.	.
Template Conservation					.
Template Sequence		I	R	A	.	G	F	D	G	I	E	I	H	G	A	H	G	Y	L	I	D	Q	F	L	K	D	G	I	N	D	R	T	D	Q	Y	G	G	S	I	A	N	R	C	R	F	L	K	Q	V	V	E	G	V	V	S	A	I	G	A	S	K	V	G	V	R	V	S	P	A	I	D	H	L	D	A	T	D	S	D	P	L
Template Known Secondary structure					.	T		S								T	T	S								T	T	T					S	T	T	S	S	S																					G	G	G							T	T			G	G	G				S
Template Predicted Secondary structure					.
Template SS confidence
		176	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.					.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.																																									.
Query SS confidence																									.	.	.	.																																									.
Query Sequence		V	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	S	.	.	.	.	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	T	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	E	M	G	.	A	D	A	V	L	V	N	T	A	I	A	V
Query Conservation																									.	.	.	.																																									.
Alig confidence																									.	.	.	.																												.													.
Template Conservation																																																								.
Template Sequence		S	L	G	L	A	V	V	G	M	L	N	K	L	Q	G	V	N	G	S	K	L	A	Y	L	H	V	T	Q	P	R	E	E	E	A	K	L	M	K	S	L	R	M	A	Y	N	G	T	F	M	S	S	G	G	F	.	N	K	E	L	G	M	Q	A	V	Q	Q	G	D	A	D	L	V	S	Y	G	R	L	F	I	A
Template Known Secondary structure																	T	T	S	S			S																						S		S						S	S		.											T	T	S		S					S
Template Predicted Secondary structure																																																								.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	D	P	V	N	M	A	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	P	D	L	V	S	R	F	K	I
Template Known Secondary structure			T	T							T
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions