Job Description P30139 Confidence 97.76% Date Thu Jan 5 11:46:05 GMT 2012 Rank 206 Aligned Residues 188 % Identity 13% Template d1piia1 SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.00

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	S	S	Q	L	M	V	E	A	I	R	A	S	G	S	Q	L	V	T	L	A	M	K	R	V	D	L	R	Q	H	N	D	A	I	L	E	P	L	I	A	A	G	V	T	L	L	P	N	T	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H
Query Conservation
Alig confidence																																																																		.	.	.	.											.	.
Template Conservation																																																																		.	.	.	.											.	.
Template Sequence		G	L	T	R	G	Q	D	A	K	A	A	Y	D	A	G	A	I	Y	G	G	L	I	F	V	A	T	S	P	R	C	V	N	V	E	Q	A	Q	E	V	M	A	A	A	P	L	Q	Y	V	G	V	F	R	N	H	D	I	A	D	V	V	D	K	A	K	.	.	.	.	V	L	S	L	A	A	V	Q	L	H	.	.
Template Known Secondary structure					S											T		S								T	T		T	T	B																						S	S												.	.	.	.			T		S						.	.
Template Predicted Secondary structure																																																																		.	.	.	.											.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.					.	.	.	.	.	330	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	P	V	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	T	V	P	V	V
Query Conservation
Alig confidence		.	.	.	.	.	.																											.																												.							.	.	.
Template Conservation		.	.	.	.	.	.																											.																												.							.	.	.
Template Sequence		.	.	.	.	.	.	G	N	E	E	Q	L	Y	I	D	T	L	R	E	A	L	P	A	H	V	A	I	W	K	A	L	S	.	V	G	E	T	L	P	A	R	E	F	Q	H	V	D	K	Y	V	L	D	N	G	Q	G	G	S	G	Q	.	R	F	D	W	S	L	.	.	.	L	N	G	Q	S	L	G	N	V	L
Template Known Secondary structure		.	.	.	.	.	.	S														S		T	T	S								.		S	S	S							T	T								S		S			S	S		.				G	G	G	.	.	.	G	T	T	S			T	T
Template Predicted Secondary structure		.	.	.	.	.	.																											.																												.							.	.	.
Template SS confidence
								335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.				.	.	.	.	.	.	400	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	E	M	G	A	D	A	V	L	V	N	T	A	I	A	V	A	D	.	.	.	D	P	V	N	M	A	K	A	F	R	L	A	V	E	A
Query Conservation																																		.	.	.
Alig confidence							.																											.	.	.						.
Template Conservation							.																																			.
Template Sequence		L	A	G	G	L	.	G	A	D	N	C	V	E	A	A	Q	T	G	C	A	G	L	D	F	N	S	A	V	E	S	Q	P	G	I	K	D	A	R	L	L	.	A	S	V	F	Q	T	L	R	A
Template Known Secondary structure				S	S		.		T	T	T						T	T			S						G	G	G				T	T								.
Template Predicted Secondary structure							.																																			.
Template SS confidence
		404	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.		.	.	.	.	.	.	.	450	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions