Job Description P30139 Confidence 93.98% Date Thu Jan 5 11:46:05 GMT 2012 Rank 344 Aligned Residues 134 % Identity 19% Template d1neya_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 1.20

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	T	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	P	V	L	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		K	A	S	G	A	F	T	G	E	N	S	V	D	Q	I	K	.	.	.	.	D	V	G	A	K	Y	V	I	L	G	H	S	E	R	R	S	Y	F	H	E	D	D	K	F	I	A	D	K	T	K	F	A	L	G	Q	G	V	G	V	I	L	C	I	G	E	T	L	E	E	K	K	A	G	K	T	L	D	V	V	E
Template Known Secondary structure		S	S	S	S	S		T	T									.	.	.	.		T	T							S							T	T																	T	T																T	T
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
							137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.															.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence		.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		.	.	.	.	.	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	E	M	.
Query Conservation		.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence		.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.											.												.
Template Conservation																																																																					.
Template Sequence		R	Q	L	N	A	V	L	E	E	V	K	D	F	T	N	V	V	V	A	Y	E	P	V	A	I	G	T	G	L	A	A	T	P	E	D	A	Q	D	I	H	A	S	I	R	K	F	L	A	S	K	L	G	D	K	A	A	S	E	L	R	I	L	Y	G	G	S	A	.	N	G	S	N	A	V	T	F	K	D	K	A
Template Known Secondary structure															T	T										T	T	T	S																																					S	S		.		T	T	T	G	G	G	G	T	T		T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.
		197	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	D	A	V	L	V	N	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	D	G	F	L	V	G	G	A
Template Known Secondary structure		T							S	G	G
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions