Job Description P30139 Confidence 93.55% Date Thu Jan 5 11:46:05 GMT 2012 Rank 354 Aligned Residues 146 % Identity 16% Template d1m6ja_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 1.50

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.															.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		G	A	Y	T	G	E	V	H	V	G	M	L	V	.	.	.	.	D	C	Q	V	P	Y	V	I	L	G	H	S	E	R	R	Q	I	F	H	E	S	N	E	Q	V	A	E	K	V	K	V	A	I	D	A	G	L	K	V	I	A	C	I	G	E	T	E	A	Q	R	I	A	N	Q	T	E	E	V	V	A	A	Q	L
Template Known Secondary structure		S	S		T	T			B						.	.	.	.		T	T							S								S																		T																T	T
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.															.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure													.	.	.									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	K	R	L	E	E	V	G	C	A	A	.	.	.	V	M	P	L	G	A	P	I	.	.	.	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	E	M
Query Conservation													.	.	.									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.									.	.	.							.														.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																	.																																					.
Template Sequence		K	A	I	N	N	A	I	S	K	E	A	W	K	N	I	I	L	A	Y	E	P	V	W	A	I	G	T	G	K	T	A	.	T	P	D	Q	A	Q	E	V	H	Q	Y	I	R	K	W	M	T	E	N	I	S	K	E	V	A	E	A	T	R	I	Q	Y	G	G	S	V	.	N	P	A	N	C	N	E	L	A	K	K
Template Known Secondary structure								S		T	G	G	G	G	G								G	G	G	S	S	S	S				.																				T								S						S			.		T	T	T						T	S
Template Predicted Secondary structure																																	.																																					.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.
			197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	A	D	A	V	L	V	N	T	A	I	A	V	A	D	D	P	V	N	M	A	K	A	F	R	L
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	D	I	D	G	F	L	V	G	G	A	S	L	D	A	A	K	F	K	T	I	I	N	S	V	S	E
Template Known Secondary structure		T	T							S	G	G	G	G	S									G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions