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Job DescriptionP30139
Confidence99.02%DateThu Jan 5 11:46:05 GMT 2012
Rank150Aligned Residues198
% Identity13%Templated1km4a_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Decarboxylase
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60. ........70.........80.........
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Query Sequence  SHLFTGTGKFASSQLMVEAIRASGSQLVTLAMKRVDLRQHNDAILEPLIAA. GVTLLPNTSGAKTAEEAIFAAHLAREAL
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Template Sequence  NRLILAMD. LMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFAVADIPETNEKICRATFKA.
Template Known Secondary structure  GG
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SSTTT
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T


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   13......20 .........30.........40.........50.........60.........70.........80.........90
 
   90.........100.........110.........120.........130... ......140.........150.........
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Query Sequence  GTNWLKLEIHPDARWLLPDPIETLKAAETLVQQGFVVLPYCGAD. . . . . . . . . . PVLCKRLEEVGCAAVMPLGAPIGSNQ
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Template Sequence  GADAIIVHGFPGAD. . . . . SVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTR. . . . .
Template Known Secondary structure  T
SSTT
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SSGGGGTTT



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   91........100.... .....110.........120.........130.........140.........150.........160
 
   160.........170..... ....180.........190.........200.........210.........220....
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Query Sequence  GLETRAMLEIIIQQAT. VPVVVDAGIGVPSHAAQALEMGADAVLVNTAIAVADDPVNMAKAFRLAV
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Template Sequence  . . . . PERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESI
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SSS

BSTTSB
TTT
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   161........170.........180.........190.........200.........210.........220..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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