Job Description P30139 Confidence 97.21% Date Thu Jan 5 11:46:05 GMT 2012 Rank 235 Aligned Residues 185 % Identity 21% Template d1gk8a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.4

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110							.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.																																										.	.	.	.	.	.
Query SS confidence																									.	.	.																																										.	.	.	.	.	.
Query Sequence		L	R	Q	H	N	D	A	I	L	E	P	L	I	A	A	G	V	T	L	L	P	N	T	.	.	.	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	.	.	.	.	.	.	E	T	L	K	A	A	E
Query Conservation																									.	.	.																																										.	.	.	.	.	.
Alig confidence				.																					.	.	.																			.								.															.	.	.	.	.	.
Template Conservation				.																																										.								.
Template Sequence		P	H	.	G	I	Q	V	E	R	D	K	L	N	K	Y	G	R	G	L	L	G	C	T	I	K	P	K	L	G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	.	G	G	L	D	F	T	D	.	D	E	N	V	N	S	Q	P	F	M	R	W	R	D	R	F	L	F	V	A	E	A	I	Y	K	A	Q
Template Known Secondary structure				.										T			S	S								S	S	S	S																	.	T	T		S	B			.		T	T		S	S	B	T	T	B
Template Predicted Secondary structure				.																																										.								.
Template SS confidence
		152	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	.	.	.	.	P	V	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	T	G	E	V	K	G	H	Y	L	N	A	T	A	G	T	C	E	E	M	M	K	R	A	V	A	K	E	L	G	V	P	I	I	M	H	D	Y	L	T	G	G	F	T	A	N	T	S	L	A	I	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	R	N	H	G	I	H
Template Known Secondary structure					S	S			B								S	S											T	T	T	T		S																									T								T	T						S		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
																							157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.																							.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	T	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation																																																																									.
Template Sequence		F	R	V	L	A	K	A	L	R	M	S	G	G	D	H	L	H	S	G	T	V	V	G	K	L	E	G	E	R	E	V	T	L	G	F	V	D	L	M	R	D	D	Y	V	E	K	D	R	S	R	G	I	Y	F	T	Q	D	W	S	M	P	G	V	M	P	V	A	S	G	G	I	.	H	V	W	H	M	P	A	L
Template Known Secondary structure															S							S	S	S	S	S																	S					B	G	G	G	T	B		S															S	S		.		G	G	G
Template Predicted Secondary structure																																																																									.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.
		194		.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure			.												.								.
Query SS confidence			.												.								.
Query Sequence		L	.	E	M	G	A	D	A	V	L	V	N	T	.	A	I	A	V	A	D	D	.	P	V	N	M	A	K	A	F	R	L	A	V	E	A	G	L	L	A	R	Q	S	G	P
Query Conservation			.												.								.
Alig confidence			.												.								.
Template Conservation
Template Sequence		V	E	I	F	G	D	D	A	C	L	Q	F	G	G	G	T	L	G	H	P	W	G	N	A	P	G	A	A	A	N	R	V	A	L	E	A	C	T	Q	A	R	N	E	G	R
Template Known Secondary structure							S	S	S					S					T	S	T	T																						T	T
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions