Job Description P30139 Confidence 99.78% Date Thu Jan 5 11:46:05 GMT 2012 Rank 73 Aligned Residues 217 % Identity 18% Template d1djqa1 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.20

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.								20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																		.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	I	A	D	K	T	F	D	S	H	L	F	T	G	T	G	K	.	.	.	.	.	.	.	F	A	S	S	Q	L	M	V	E	A	I	R	A	S	G	S	Q	L	V	T	L	A	M	K	R	V	D	L	R	Q	H	N	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	E	P
Query Conservation																				.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Q	I	G	P	K	T	L	R	N	R	F	Y	Q	V	P	H	A	I	G	A	G	S	D	K	P	G	F	Q	S	A	H	R	S	V	K	A	E	G	G	W	A	A	L	N	T	E	Y	C	S	I	N	P	E	S	D	D	T	H	R	L	S	A	R	I	W	D	E	G	D	V	R	N	L	K	A	M	T	D	E
Template Known Secondary structure					T	T				S	S	S									S		T	T	T															T	T		S									S	S	T	T	S			T	T	S						S	S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		58	.	60	.	.	.	.	.	.	.	.	.	70																																							.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	A	A	G	V	T	L	L	P	N	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																																																						.
Template Sequence		V	H	K	Y	G	A	L	A	G	V	E	L	W	Y	G	G	A	H	A	P	N	M	E	S	R	A	T	P	R	G	P	S	Q	Y	A	S	E	F	E	T	L	S	Y	C	K	E	M	D	L	S	D	I	A	Q	V	Q	Q	F	Y	V	D	A	A	K	R	S	R	D	.	A	G	F	D	I	V	Y	V	Y	G	A
Template Known Secondary structure					T	T											G	G	G	S			T	T	T							S	S			B		S	S	S	T	T		B																										.		T		S
Template Predicted Secondary structure																																																																						.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.
		100	.	.	.	.	.	.																						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.														.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	A	R	W	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	L	C	K	R	L	E	E	V	G	C
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	S	Y	L	P	L	Q	F	L	N	P	Y	Y	N	K	R	T	D	K	Y	G	G	S	L	E	N	R	A	R	F	W	L	E	T	L	E	K	V	K	H	A	V	G	S	D	C	A	I	A	T	R	F	G	V	D	T	V	Y	G	P	G	Q	I	E	A	E	V	D	G	Q	K	F	V	E	M	A	D	S	L	V
Template Known Secondary structure		T	T									T	T	T					S	T	T	S	S	S																				T	T	T	S											S	S		T	T	S			T	T	T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		146	.	.	.	150	.	.	.	.	.											.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																																											.
Query SS confidence												.	.	.	.	.	.	.	.	.	.																																											.
Query Sequence		A	A	V	M	P	L	G	A	P	I	.	.	.	.	.	.	.	.	.	.	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	T	V	P	V	V	V	D	A	G	I	G	V	P	S	H	A	A	Q	A	L	E	M	G	.	A	D	A	V	L	V	N	T	A	I	A	V	A	D	D	P	V
Query Conservation												.	.	.	.	.	.	.	.	.	.																																											.
Alig confidence												.	.	.	.	.	.	.	.	.	.																																											.
Template Conservation
Template Sequence		D	M	W	D	I	T	I	G	D	I	A	E	W	G	E	D	A	G	P	S	R	F	Y	Q	Q	G	H	T	I	P	W	V	K	L	V	K	Q	V	S	K	K	P	V	L	G	V	G	R	Y	T	D	P	E	K	M	I	E	I	V	T	K	G	Y	A	D	I	I	G	C	A	R	P	S	I	A	D	P	F	L	P
Template Known Secondary structure		S							S		S	T	T	G	G	G	T	S			T	T	T			T	T	T	T									T	T		S	S						S														T	T	S		S	B				S							T	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		215	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	A	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	K	V	E	Q
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions