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Job DescriptionP30139
Confidence91.96%DateThu Jan 5 11:46:05 GMT 2012
Rank387Aligned Residues154
% Identity16%Templatec9rubB_
PDB info PDB header:lyase(carbon-carbon)Chain: B: PDB Molecule:ribulose-1,5-bisphosphate carboxylase; PDBTitle: crystal structure of activated ribulose-1,5-bisphosphate2 carboxylase complexed with its substrate, ribulose-1,5-3 bisphosphate
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50........ .60......... 70.........80.........90.........100.........110
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Query Sequence  KRVDLRQHNDAILEPL. . . IAAGVTLLPNT. . . SGAKTAEEAIFAAHLAREALGTNWLKLEIHPDARWLLPDPI. . . . . .
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Template Sequence  LFDGPSVNISALWKVLGRPEVDGGLVVGTIIKPKLGLRPKPFAEACHAFWL. GG. DFIKNDEPQGNQPFAPLRDTIALVA
Template Known Secondary structure  TS


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   135....140.........150.........160.........170.........180..... .. ..190.........200.........210..
 
   111........120.........130... ......140...... ...150.........160.........170.........
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Query Sequence  ETLKAAETLVQQGFVVLPYCGAD. . . . . PVLCKRLEEVGCA. . . . . AVMPLGAPIGSNQGLETRAMLEIIIQQATVPVV.
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Template Sequence  DAMRRAQDETGEAKLFSANITADDPFEIIARGEYVLETFGENASHVALLVDGYVAG. . . . . . . AAAITTARRRFPDNFLH
Template Known Secondary structure  SS




SSSGGGGGG
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   213......220.........230.........240.........250.........260........ .270.........280.....
 
   180.........190...... ...200.....
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Query Sequence  . . . . . . . . . . . . VDAGIGVPSHAAQALEM. GADAVLVNT
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Template Sequence  YHRAGHGAVTSPQSKRGYTAFVHCKMARLQGASGIHTGT
Template Known Secondary structure 

TSSSS

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   286...290.........300.........310.........320....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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