 |
Job Description | P30139 | Confidence | 86.81% | Date | Thu Jan 5 11:46:05 GMT 2012 |
Rank | 440 | Aligned Residues | 99 |
% Identity | 16% | Template | c3tr9A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:dihydropteroate synthase; |
PDBTitle: structure of a dihydropteroate synthase (folp) in complex with pteroic2 acid from coxiella burnetii
|
Resolution | 1.90 Å |
|
 |
  |   |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | G | A | K | T | A | E | E | A | I | F | A | A | H | L | A | R | E | A | L | G | T | N | W | L | K | L | E | . |
. |
. |
. |
. |
. |
. |
I | H | P | D | A | R | W | L | L | P | D | P | I | E | T | L | K | A | A | E | T | L | V | Q | Q | G | F | V | V | L | P | Y | C | G | A | D | P | V | L | C | K | R | L | E | E |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|   |
|   |
|   | . | . | . | . | . | . | . |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |
|
|
|   |   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|
|
| . | . | . |
|
|   |   |   |   |
|   |
|   |
|
|   |
Template Sequence |   |
H | P | H | L | D | L | N | S | A | L | R | T | A | E | K | X | V | D | E | . |
G | A | D | I | L | D | I | G | G | E | A | T | N | P | F | V | S | P | S | T | Q | I | E | L | D | R | L | L | P | V | I | D | A | I | K | K | R | F | P | Q | L | I | S | V | . |
. |
. |
D | T | S | R | P | R | V | X | R | E | A | V | N |
Template Known Secondary structure |   |
| B |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T |
| S |  |  |  |  |  |
|
|
| S |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  | . | . | . |  |
| S |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | |
|
|
. | . | . | . | 110 | . | . | . | . | . | . | . | . |
  |
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | C | A | A | V | M | P | L | G | A | P | I | G | S | N | Q | G | L | E | T | R | A | M | L | E | I | I | I | Q | Q | A | T | V | P | V | V | V |
Query Conservation |   |
|
|
|
|   |
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
Template Sequence |   |
T | G | A | D | X | I | . |
. |
. |
. |
. |
. |
. |
. |
N | D | Q | R | A | L | Q | L | D | D | A | L | T | T | V | S | A | L | K | T | P | V | C | L |
Template Known Secondary structure |   |
 | T |
|
|  |  | . | . | . | . | . | . | . | . |  |  | T | T | T | T |
| S | T | T |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
124 | . | . | . | . | . | |
|
|
|
|
|
|
|
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|