Job Description P30139 Confidence 92.30% Date Thu Jan 5 11:46:05 GMT 2012 Rank 378 Aligned Residues 185 % Identity 21% Template c3t4cD_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria Resolution 1.95 Å

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		2	.	.	.	.	.	.	.			10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure										.	.							.	.																	.	.	.
Query SS confidence										.	.							.	.																	.	.	.
Query Sequence		L	R	I	A	D	K	T	F	.	.	D	S	H	L	F	T	.	.	G	T	G	K	F	A	S	S	Q	L	M	V	E	A	I	R	.	.	.	A	S	G	S	Q	L	V	T	L	A	M	K	R	V	D	L	R	Q	H	N	D	A	I	L	E	P	L	I	A	A	G	V	T	L	L	P	N	T	S	G	A	K	T
Query Conservation										.	.							.	.																	.	.	.
Alig confidence										.	.							.	.																	.	.	.
Template Conservation
Template Sequence		M	K	L	Y	D	F	E	V	G	L	D	Q	P	F	F	L	I	A	G	T	C	V	V	E	S	E	Q	M	T	I	D	T	A	G	R	L	K	E	I	C	A	K	L	N	V	P	F	I	Y	K	S	S	M	D	E	G	L	R	I	L	G	E	V	K	R	Q	L	G	L	P	V	L	T	D	V	H	S	I	D	E
Template Known Secondary structure					T	T				S	T	T	S									S	S																					T	T																								T									S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.											.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	.	.	.	.	.	.	.	.	.	.	P	V	L	C	K	R	L	E	E	V	G
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.			.														.	.	.	.	.	.								.																	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.			.														.	.	.	.	.	.								.
Template Sequence		I	E	Q	V	A	.	.	.	.	.	.	.	.	S	V	.	V	D	V	L	Q	T	P	A	F	L	C	R	Q	.	.	.	.	.	.	T	D	F	I	H	A	C	.	A	R	S	G	K	P	V	N	I	K	K	G	Q	F	L	A	P	H	D	M	K	N	V	I	D	K	A	R	E	A	A	R	E	A	G	L	S
Template Known Secondary structure							.	.	.	.	.	.	.	.	T	T	.		S						G	G	G	T	T		.	.	.	.	.	.								.		T	T	S	S								T	T	S		G	G	G															T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.			.														.	.	.	.	.	.								.
Template SS confidence
		97	.	.	100	.									.	.		.	.	.	.	.	.	110	.	.	.	.	.	.							.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		145	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.										.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure								.	.																																					.	.	.	.	.	.	.	.	.
Query SS confidence								.	.																																					.	.	.	.	.	.	.	.	.
Query Sequence		C	A	A	V	M	P	.	.	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	T	V	P	V	V	V	D	A	G	I	G	V	.	.	.	.	.	.	.	.	.	P	S	H	A	A	Q	A	L	E	M	G	A	D	A	V	L	V
Query Conservation								.	.																																					.	.	.	.	.	.	.	.	.
Alig confidence								.	.																							.														.	.	.	.	.	.	.	.	.
Template Conservation																																.
Template Sequence		E	D	R	F	M	A	C	E	R	G	V	S	F	G	Y	N	N	L	V	S	D	M	R	S	L	A	I	M	R	E	.	T	S	A	P	V	V	F	D	A	T	H	S	V	Q	L	P	G	Q	R	E	F	V	P	V	L	A	R	A	A	V	A	T	G	V	A	G	L	F	M
Template Known Secondary structure		S													S	S	S												G	G	G	.	G	S	S										T						T	T															S
Template Predicted Secondary structure																																.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions