Job Description P30139 Confidence 85.34% Date Thu Jan 5 11:46:05 GMT 2012 Rank 448 Aligned Residues 164 % Identity 13% Template c3t07D_ PDB info PDB header:transferase/transferase inhibitor Chain: D: PDB Molecule:pyruvate kinase; PDBTitle: crystal structure of s. aureus pyruvate kinase in complex with a2 naturally occurring bis-indole alkaloid Resolution 3.30 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120						.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	.	.	.	.	.	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	P	V	L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	L	G	A	P	I	G	S	N
Query Conservation																																							.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.																.	.	.	.	.																								.
Template Conservation																.	.	.	.	.	.	.	.																																												.
Template Sequence		R	F	G	I	K	E	N	V	D	F	I	A	A	S	.	.	.	.	.	.	.	.	F	V	R	R	P	S	D	V	L	E	I	R	E	I	L	E	E	Q	K	A	N	I	S	V	F	P	K	I	E	N	Q	E	G	I	D	N	I	E	E	I	L	E	V	.	S	D	G	L	M	V	A	R	G	D	M	G	V	E
Template Known Secondary structure							T	T		S					T	.	.	.	.	.	.	.	.	T			S															T											S						T							T	.		S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.																																												.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.									.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.													.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure									.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	G	L	E	T	R	A	.	.	.	.	M	L	E	I	I	I	Q	Q	A	T	V	P	V	V	V	D	A	G	I	G	V	.	.	.	.	.	.	.	.	.	.	.	.	P	S	H	A	A	Q	A	L	E	M	G	A	D	A	V	L	V	N	T	A	I	A	V	A	D	D	P	V	N	M	A	K	A	F	R	L
Query Conservation									.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	P	P	E	K	V	P	M	V	Q	K	D	L	I	R	Q	C	N	K	L	G	K	P	V	I	T	A	T	Q	M	L	D	S	M	Q	R	N	P	R	A	T	R	A	E	A	S	D	V	A	N	A	I	Y	D	G	T	D	A	V	M	L	S	G	E	T	A	A	G	L	Y	P	E	E	A	V	K	T	M	R	N
Template Known Secondary structure		S		G	G	G														T	T	T							S	S	S	S	G	G	G	G	T	S	S	S																T		S					S					T		S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	E	A	G	L	L	A	R	Q	S	G	P	G	S	R	S	Y	F	A	H	A	T	S	P	L	T	G	F	L	E	A	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	V	S	A	E	A	A	Q	D	Y	K	K	L	L	S	D	R	T	K	L	V	E	T	S	L	V	N	A	I	G	I	S	V
Template Known Secondary structure									T														S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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