Job Description P30139 Confidence 88.15% Date Thu Jan 5 11:46:05 GMT 2012 Rank 431 Aligned Residues 186 % Identity 16% Template c3stgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10			.	.	.	.	.			.	.	.	.	20	.	.	.	.								.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.												.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.						.	.										.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.						.	.										.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	I	A	D	K	T	F	D	.	.	S	H	L	F	T	.	.	G	T	G	K	F	A	S	S	Q	.	.	.	.	.	.	.	L	M	V	E	A	I	R	A	S	G	S	Q	L	V	T	L	A	M	.	.	.	.	.	.	.	.	.	.	.	K	R	V	D	L	R	Q	H	N	D	A	I	L	E	P	L	I
Query Conservation											.	.						.	.										.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.						.	.										.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	K	I	N	D	I	T	L	G	N	N	S	P	F	V	L	F	G	G	I	N	V	L	E	S	L	D	S	T	L	Q	T	C	A	H	Y	V	E	V	T	R	K	L	G	I	P	Y	I	F	K	A	S	F	D	K	P	R	S	S	I	H	S	Y	R	G	V	G	L	E	E	G	L	K	I	F	E	K	V	K	A
Template Known Secondary structure					T	T					T	T	S																																T									S			T	T	S		T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.
Predicted Secondary structure																																																																												.	.	.	.
Query SS confidence																																																																												.	.	.	.
Query Sequence		A	A	G	V	T	L	L	P	N	T	S	G	A	K	T	A	E	E	A	I	F	A	A	H	L	A	R	E	A	L	G	T	N	W	L	K	L	E	I	H	P	D	A	R	W	L	L	P	D	P	I	E	T	L	K	A	A	E	T	L	V	Q	Q	G	F	V	V	L	P	Y	C	G	A	D	.	.	.	.	P	V
Query Conservation																																																																												.	.	.	.
Alig confidence														.	.	.	.	.	.	.											.	.														.	.	.	.	.	.										.															.	.	.	.
Template Conservation														.	.	.	.	.	.	.											.	.														.	.	.	.	.	.										.
Template Sequence		E	F	G	I	P	V	I	T	D	V	H	E	.	.	.	.	.	.	.	P	H	Q	C	Q	P	V	A	E	V	.	.	C	D	V	I	Q	L	P	A	F	L	A	R	Q	.	.	.	.	.	.	T	D	L	V	V	A	M	A	K	.	T	G	N	V	V	N	I	K	K	P	Q	F	L	S	P	S	Q	M	K	N
Template Known Secondary structure													S	.	.	.	.	.	.	.											.	.		S						G	G	G	T	T		.	.	.	.	.	.										.											T	T	S		G	G	G
Template Predicted Secondary structure														.	.	.	.	.	.	.											.	.														.	.	.	.	.	.										.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.								.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.							190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																	.	.																									.																.	.	.	.	.	.
Query SS confidence																	.	.																									.																.	.	.	.	.	.
Query Sequence		L	C	K	R	L	E	E	V	G	C	A	A	V	M	P	.	.	L	G	A	P	I	G	S	N	Q	G	L	E	T	R	A	M	L	E	I	I	I	Q	Q	A	.	T	V	P	V	V	V	D	A	G	I	G	V	P	S	H	.	.	.	.	.	.	A	A	Q	A	L	E	M	G	A	D	A	V	L	V
Query Conservation																	.	.																									.																.	.	.	.	.	.
Alig confidence																	.	.																									.																.	.	.	.	.	.
Template Conservation
Template Sequence		I	V	E	K	F	H	E	A	G	N	G	K	L	I	L	C	E	R	G	S	S	F	G	Y	D	N	L	V	V	D	M	L	G	F	G	V	M	K	Q	T	C	G	N	L	P	V	I	F	D	V	T	H	S	L	G	R	R	A	Q	A	L	D	L	A	L	A	G	M	A	T	R	L	A	G	L	F	L
Template Known Secondary structure									T	T														S	S	S						T										T	T	T							T	T	T	T		S	S	G	G	G										T	T			S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions