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Job DescriptionP30139
Confidence79.23%DateThu Jan 5 11:46:05 GMT 2012
Rank483Aligned Residues90
% Identity24%Templatec3sqlB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:glycosyl hydrolase family 3; PDBTitle: crystal structure of glycoside hydrolase from synechococcus
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   137..140.........150........ .160.........170... ......180.... .....190.........200.
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Query Sequence  CKRLEEVGCAAVMPLGAPIGSN. . . . QGLETRAMLEIIIQQ. . . ATVPVVVDAGI. . . . . . . . GVPSHAAQALEMGADAV
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Template Sequence  FKAAIQGGVDAVXNAHLXIPAWDQQYPATLSPAILTGQLRHKLGFKGLIVTDALVXGGITQFAAPDTVVVQAIAAGADIL
Template Known Secondary structure  TT
S


B
TTT
SSS
GGG







T


S


TTSTTS
T
SB
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   226...230.........240.........250.........260.........270.........280.........290.........300.....
 
   202.......210.........220.........230..
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Query Sequence  LVNTAIAVADDPVNMAKAFRLAVEAGLLARQ
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Template Sequence  LXPP. . . . . . DVDGAIIAIETAIKTGQLSES
Template Known Secondary structure  S
S......
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   306... 310.........320.........330
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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